Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275332	Apg7l	autophagy 7-like (S. cerevisiae)	6		74244
Gene Ontology	autophagy | protein binding | ubiquitin activating enzyme activity
Human Homolog	APG7L[APG7 autophagy 7-like (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 92 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTCAAAAAA (22) 4.9 0.0049 P8 Cb GC TGTCTGCCTG (3) 3.3 0.0033 P8 Cb GC CTGTCTGTGT (3) 1.6 0.0016 P8 Cb GC GAGTAACTGT 1.6 0.0016 P8 Cb GC GTTTGCCTGA (9) 1.6 0.0016 P8 Cb GC TCCTCAAAAA (3) 1.6 0.0016 Cb medulloblastoma TCTCAAAAAA (22) 9.2 0.0092 Cb medulloblastoma TCCTCAAAAA (3) 4.6 0.0046 Cb medulloblastoma GAGTAACTGT 2.3 0.0023 Cb medulloblastoma TGTCTGCCTG (3) 2.3 0.0023 P8 GC+1d culture TCTCAAAAAA (22) 3.4 0.0034 P8 GC+1d culture GTTTGCCTGA (9) 2.3 0.0023 P8 GC+1d culture CCACCCTAGG (3) 1.1 0.0011 P8 GC+1d culture GAGATGGGGT (4) 1.1 0.0011 P8 GC+1d culture GAGTAACTGT 1.1 0.0011 P8 GC+1d culture GCTTGTGACT (2) 1.1 0.0011 P8 GC+1d culture TGTGCCTGCA (2) 1.1 0.0011 P8 GC+SHH+1d culture TCTCAAAAAA (22) 3.5 0.0035 P8 GC+SHH+1d culture GAGATGGGGT (4) 2.3 0.0023 P8 GC+SHH+1d culture GAGTAACTGT 2.3 0.0023 P8 GC+SHH+1d culture ACAACACTGC (4) 1.2 0.0012 P8 GC+SHH+1d culture AGTGACGAGG 1.2 0.0012 3T3 fibroblasts GTTTGCCTGA (9) 10.5 0.0105 3T3 fibroblasts GAGATGGGGT (4) 3.5 0.0035 3T3 fibroblasts TGTCTGCCTG (3) 3.5 0.0035 E15 cortex GTTTGCCTGA (9) 9.9 0.0099 E15 cortex ACAACACTGC (4) 4.9 0.0049 E15 cortex CTGTCTGTGT (3) 4.9 0.0049 E15 cortex TCTCAAAAGA (5) 4.9 0.0049 E15 cortex TGTGCCTGCA (2) 4.9 0.0049 P1 cortex GTTTGCCTGA (9) 4.5 0.0045 P1 cortex TCTCAAAAGA (5) 4.5 0.0045 P1 cortex TGTGCCTGCA (2) 4.5 0.0045 Hypothalamus TCTCAAAAAA (22) 5.4 0.0054 Hypothalamus CCACCCTAGG (3) 1.8 0.0018 Hypothalamus GGGGCCAGAT 1.8 0.0018 E12.5 retina CCACCCTAGG (3) 1.9 0.0019 E14.5 retina GTTTGCCTGA (9) 3.6 0.0036 E14.5 retina TCTCAAAAAA (22) 3.6 0.0036 E14.5 retina CTGTCTGTGT (3) 1.8 0.0018 E14.5 retina GAGTAACTGT 1.8 0.0018 E16.5 retina TCTCAAAAAA (22) 3.6 0.0036 E16.5 retina AGTGACGAGG 1.8 0.0018 E16.5 retina CCACCCTAGG (3) 1.8 0.0018 E16.5 retina GAGATGGGGT (4) 1.8 0.0018 E16.5 retina TGTCTGCCTG (3) 1.8 0.0018 E16.5 retina TGTGCCTGCA (2) 1.8 0.0018 E18.5 retina TCTCAAAAAA (22) 5.5 0.0055 E18.5 retina CTGTCTGTGT (3) 1.8 0.0018 E18.5 retina GAGTAACTGT 1.8 0.0018 E18.5 retina GTTTGCCTGA (9) 1.8 0.0018 E18.5 retina TCCTCAAAAA (3) 1.8 0.0018 E18.5 retina TCTCAAACAA (4) 1.8 0.0018 E18.5 retina TGTCTGCCTG (3) 1.8 0.0018 E18.5 retina TGTGCCTGCA (2) 1.8 0.0018 P0.5 retina GGGGCCAGAT 2 0.002 P0.5 retina GTTTGCCTGA (9) 2 0.002 P0.5 retina TGTGCCTGCA (2) 2 0.002 P2.5 retina GAGTAACTGT 1.8 0.0018 P2.5 retina GCTTGTGACT (2) 1.8 0.0018 P2.5 retina GGGGCCAGAT 1.8 0.0018 P2.5 retina GTTTGCCTGA (9) 1.8 0.0018 P2.5 retina TCCTCAAAAA (3) 1.8 0.0018 P2.5 retina TCTCAAAAAA (22) 1.8 0.0018 P2.5 retina TCTCAAAAGA (5) 1.8 0.0018 P4.5 retina AGTGACGAGG 2 0.002 P4.5 retina GTTTGCCTGA (9) 2 0.002 P4.5 retina TCCTCAAAAA (3) 2 0.002 P4.5 retina TCTCAAAAAA (22) 2 0.002 P4.5 retina TGTCTGCCTG (3) 2 0.002 P4.5 retina TGTGCCTGCA (2) 2 0.002 P6.5 retina TCTCAAAAAA (22) 3.3 0.0033 P6.5 retina ACAACACTGC (4) 1.7 0.0017 P6.5 retina GAGTAACTGT 1.7 0.0017 P6.5 retina GCTTGTGACT (2) 1.7 0.0017 P6.5 retina TCCCAGCATC (2) 1.7 0.0017 P6.5 retina TCTCAAAAGA (5) 1.7 0.0017 P6.5 retina TCTCAAACAA (4) 1.7 0.0017 P10.5 crx- retina GAGTAACTGT 1.9 0.0019 P10.5 crx- retina GTTTGCCTGA (9) 1.9 0.0019 P10.5 crx- retina TCTCAAACAA (4) 1.9 0.0019 P10.5 crx+ retina CCACCCTAGG (3) 3.8 0.0038 P10.5 crx+ retina GTTTGCCTGA (9) 3.8 0.0038 P10.5 crx+ retina TCTCAAAAAA (22) 3.8 0.0038 P10.5 crx+ retina TGTGCCTGCA (2) 1.9 0.0019 Adult retinal TCCCAGCATC (2) 44.4 0.0444 Adult retinal TCTCAAAAAA (22) 7.4 0.0074 Adult retinal AGTGACGAGG 1.9 0.0019 Adult retinal TCTCAAAAGA (5) 1.9 0.0019 ONL TCCCAGCATC (2) 26.8 0.0268 ONL TCTCAAAAAA (22) 7.7 0.0077 ONL GAGATGGGGT (4) 3.8 0.0038