Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.276116
5730521P14Rik
RIKEN cDNA 5730521P14 gene
6
70637
Mm.276116
BC008111
cDNA sequence BC008111
6
232339
Human Homolog
ANKRD26[ankyrin repeat domain 26]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 55 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAGAAAA (
19
)
1.6
0.0016
P8 Cb GC
ATAACAAAAA (
6
)
1.6
0.0016
Cb medulloblastoma
AAAAAGAAAA (
19
)
2.3
0.0023
Cb medulloblastoma
ATAACAAAAA (
6
)
2.3
0.0023
Cb medulloblastoma
TAGATTAATG
(
2
)
2.3
0.0023
P8 GC+1d culture
ATAACAAAAA (
6
)
3.4
0.0034
P8 GC+1d culture
AAAAAGAAAA (
19
)
1.1
0.0011
P8 GC+1d culture
TAGATTAATG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAGAAAA (
19
)
2.3
0.0023
P8 GC+SHH+1d culture
ATAACAAAAA (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
CAGATGTGGG (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TAGATTAATG
(
2
)
1.2
0.0012
3T3 fibroblasts
GTGGAGCACA
(
9
)
14
0.014
E15 cortex
AGCTCCAGGG
(
7
)
4.9
0.0049
P1 cortex
GTGGAGCACA
(
9
)
18.2
0.0182
P1 cortex
TAGATTAATG
(
2
)
4.5
0.0045
Hypothalamus
ATAACAAAAA (
6
)
1.8
0.0018
Hypothalamus
TAGATTAATG
(
2
)
1.8
0.0018
E12.5 retina
ATAACAAAAA (
6
)
3.8
0.0038
E12.5 retina
TAGATTAATG
(
2
)
3.8
0.0038
E14.5 retina
TAGATTAATG
(
2
)
5.5
0.0055
E14.5 retina
AGCTCCAGGG
(
7
)
3.6
0.0036
E14.5 retina
ATAACAAAAA (
6
)
3.6
0.0036
E14.5 retina
CAGATGTGGG (
3
)
1.8
0.0018
E16.5 retina
TAGATTAATG
(
2
)
3.6
0.0036
E16.5 retina
AAAAAGAAAA (
19
)
1.8
0.0018
E16.5 retina
AGCTCCAGGG
(
7
)
1.8
0.0018
E16.5 retina
ATAACAAAAA (
6
)
1.8
0.0018
E18.5 retina
ATAACAAAAA (
6
)
5.5
0.0055
P0.5 retina
AAAAAGAAAA (
19
)
3.9
0.0039
P0.5 retina
ATAACAAAAA (
6
)
3.9
0.0039
P0.5 retina
GTGGAGCACA
(
9
)
3.9
0.0039
P2.5 retina
AAAAAGAAAA (
19
)
3.5
0.0035
P2.5 retina
ATAACAAAAA (
6
)
3.5
0.0035
P2.5 retina
TAGATTAATG
(
2
)
3.5
0.0035
P2.5 retina
CAGATGTGGG (
3
)
1.8
0.0018
P4.5 retina
ATAACAAAAA (
6
)
5.9
0.0059
P4.5 retina
AAAAAGAAAA (
19
)
4
0.004
P4.5 retina
TAGATTAATG
(
2
)
4
0.004
P4.5 retina
CAGATGTGGG (
3
)
2
0.002
P6.5 retina
GGGAGGCAGG (
6
)
3.3
0.0033
P6.5 retina
GTGGAGCACA
(
9
)
3.3
0.0033
P6.5 retina
TAGATTAATG
(
2
)
3.3
0.0033
P6.5 retina
AGCTCCAGGG
(
7
)
1.7
0.0017
P6.5 retina
ATAACAAAAA (
6
)
1.7
0.0017
P10.5 crx- retina
AGCTCCAGGG
(
7
)
3.7
0.0037
P10.5 crx- retina
TAGATTAATG
(
2
)
3.7
0.0037
P10.5 crx- retina
GGGAGGCAGG (
6
)
1.9
0.0019
P10.5 crx+ retina
CAGATGTGGG (
3
)
1.9
0.0019
P10.5 crx+ retina
GTGGAGCACA
(
9
)
1.9
0.0019
Adult retinal
GTGGAGCACA
(
9
)
1.9
0.0019
ONL
AAAAAGAAAA (
19
)
3.8
0.0038
ONL
GGGAGGCAGG (
6
)
1.9
0.0019
ONL
GTGGAGCACA
(
9
)
1.9
0.0019
ONL
TAGATTAATG
(
2
)
1.9
0.0019
