Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.276826	Cfl2	cofilin 2, muscle	12		12632
Gene Ontology	actin binding | cytoskeleton | intracellular | nucleus
Human Homolog	CFL2[cofilin 2 (muscle)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 127 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC CCTTTCCCTT (7) 19.6 0.0196 P8 Cb GC ATGGCAATTT (4) 8.2 0.0082 P8 Cb GC AAAATAAAAA (28) 6.5 0.0065 P8 Cb GC TATTTAATTT (4) 4.9 0.0049 P8 Cb GC CCTTCCTTGC 3.3 0.0033 P8 Cb GC ACTGATATTC (2) 1.6 0.0016 P8 Cb GC AGGAGAGGGT (7) 1.6 0.0016 P8 Cb GC TAAGACAGGC 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma AAAATAAAAA (28) 9.2 0.0092 Cb medulloblastoma ATGGCAATTT (4) 4.6 0.0046 Cb medulloblastoma ACTGATTTTC (6) 2.3 0.0023 Cb medulloblastoma AGGAGAGGGT (7) 2.3 0.0023 Cb medulloblastoma CCTTTCCCTT (7) 2.3 0.0023 Cb medulloblastoma TAAGACAGGC 2.3 0.0023 Cb medulloblastoma TGCAAACAGA (15) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture CCTTTCCCTT (7) 14.8 0.0148 P8 GC+1d culture AAAATAAAAA (28) 8 0.008 P8 GC+1d culture ATGGCAATTT (4) 8 0.008 P8 GC+1d culture TATTTAATTT (4) 4.6 0.0046 P8 GC+1d culture ACTGATATTC (2) 1.1 0.0011 P8 GC+1d culture ACTGATTTTC (6) 1.1 0.0011 P8 GC+1d culture CTTCTAAGCA (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture CCTTTCCCTT (7) 16.4 0.0164 P8 GC+SHH+1d culture ATGGCAATTT (4) 9.4 0.0094 P8 GC+SHH+1d culture AAAATAAAAA (28) 5.9 0.0059 P8 GC+SHH+1d culture ACTGATTTTC (6) 2.3 0.0023 P8 GC+SHH+1d culture AGGAGAGGGT (7) 2.3 0.0023 P8 GC+SHH+1d culture GTAAGAAAAA (5) 2.3 0.0023 P8 GC+SHH+1d culture TATTTAATTT (4) 2.3 0.0023 P8 GC+SHH+1d culture AGTGGCAAGT (2) 1.2 0.0012 P8 GC+SHH+1d culture TGCAAACAGA (15) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts ATGGCAATTT (4) 3.5 0.0035 3T3 fibroblasts CCTTTCCCTT (7) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex ATGGCAATTT (4) 19.8 0.0198 E15 cortex CCTTTCCCTT (7) 9.9 0.0099 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CCTTTCCCTT (7) 13.6 0.0136 P1 cortex AAAATAAAAA (28) 9.1 0.0091 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus ATGGCAATTT (4) 7.2 0.0072 Hypothalamus AAAATAAAAA (28) 3.6 0.0036 Hypothalamus CCTTTCCCTT (7) 3.6 0.0036 Hypothalamus AGTGGCAAGT (2) 1.8 0.0018 Hypothalamus TATTTAATTT (4) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CCTTTCCCTT (7) 16.9 0.0169 E12.5 retina ATGGCAATTT (4) 15 0.015 E12.5 retina AAAATAAAAA (28) 5.6 0.0056 E12.5 retina ACTGATTTTC (6) 3.8 0.0038 E12.5 retina CCTTCCTTGC 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina AAAATAAAAA (28) 14.6 0.0146 E14.5 retina ATGGCAATTT (4) 10.9 0.0109 E14.5 retina CCTTTCCCTT (7) 3.6 0.0036 E14.5 retina TATTTAATTT (4) 3.6 0.0036 E14.5 retina TGCAAACAGA (15) 3.6 0.0036 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina ATGGCAATTT (4) 14.5 0.0145 E16.5 retina AAAATAAAAA (28) 10.9 0.0109 E16.5 retina CCTTTCCCTT (7) 7.2 0.0072 E16.5 retina AGGAGAGGGT (7) 1.8 0.0018 E16.5 retina CTTCTAAGCA (2) 1.8 0.0018 E16.5 retina GTAAGAAAAA (5) 1.8 0.0018 E16.5 retina TATTTAATTT (4) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina AAAATAAAAA (28) 16.4 0.0164 E18.5 retina TATTTAATTT (4) 7.3 0.0073 E18.5 retina ATGGCAATTT (4) 5.5 0.0055 E18.5 retina CCTTTCCCTT (7) 3.6 0.0036 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina CCTTTCCCTT (7) 11.8 0.0118 P0.5 retina AAAATAAAAA (28) 5.9 0.0059 P0.5 retina AGGAGAGGGT (7) 3.9 0.0039 P0.5 retina ATGGCAATTT (4) 3.9 0.0039 P0.5 retina ACTGATATTC (2) 2 0.002 P0.5 retina ACTGATTTTC (6) 2 0.002 P0.5 retina CTTCTAAGCA (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina AAAATAAAAA (28) 19.4 0.0194 P2.5 retina CCTTTCCCTT (7) 15.8 0.0158 P2.5 retina ATGGCAATTT (4) 5.3 0.0053 P2.5 retina ACTGATATTC (2) 1.8 0.0018 P2.5 retina TATTTAATTT (4) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina AAAATAAAAA (28) 21.8 0.0218 P4.5 retina ATGGCAATTT (4) 5.9 0.0059 P4.5 retina CCTTTCCCTT (7) 5.9 0.0059 P4.5 retina ACTGATTTTC (6) 4 0.004 P4.5 retina TATTTAATTT (4) 4 0.004 P4.5 retina AGGAGAGGGT (7) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina AAAATAAAAA (28) 11.7 0.0117 P6.5 retina CCTTTCCCTT (7) 10 0.01 P6.5 retina ACTGATATTC (2) 1.7 0.0017 P6.5 retina CTTCTAAGCA (2) 1.7 0.0017 P6.5 retina TGCAAACAGA (15) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CCTTTCCCTT (7) 7.4 0.0074 P10.5 crx- retina AAAATAAAAA (28) 3.7 0.0037 P10.5 crx- retina TATTTAATTT (4) 3.7 0.0037 P10.5 crx- retina TGCAAACAGA (15) 3.7 0.0037 P10.5 crx- retina ACTGATTTTC (6) 1.9 0.0019 P10.5 crx- retina GTAAGAAAAA (5) 1.9 0.0019 P10.5 crx- retina TAAGACAGGC 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina ATGGCAATTT (4) 3.8 0.0038 P10.5 crx+ retina CCTTTCCCTT (7) 3.8 0.0038 P10.5 crx+ retina TAAGACAGGC 3.8 0.0038 P10.5 crx+ retina AAAATAAAAA (28) 1.9 0.0019 P10.5 crx+ retina AGGAGAGGGT (7) 1.9 0.0019 P10.5 crx+ retina CTTCTAAGCA (2) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CCTTTCCCTT (7) 5.6 0.0056 Adult retinal AAAATAAAAA (28) 1.9 0.0019 Adult retinal TATTTAATTT (4) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL AAAATAAAAA (28) 11.5 0.0115 ONL TATTTAATTT (4) 7.7 0.0077 ONL ATGGCAATTT (4) 3.8 0.0038 ONL CTTCTAAGCA (2) 1.9 0.0019 ONL TAAGACAGGC 1.9 0.0019