Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277779	Adprt1	ADP-ribosyltransferase (NAD+, poly (ADP-ribose) polymerase) 1	1	1 98.6 cM	11545
Gene Ontology	base-excision repair | DNA binding | DNA metabolism | DNA repair | intracellular | NAD+ ADP-ribosyltransferase activity | nucleus | protein amino acid ADP-ribosylation | protein binding | protein binding | regulation of growth rate | telomere maintenance | transferase activity | transferase activity, transferring glycosyl groups
Human Homolog	PARP1[poly (ADP-ribose) polymerase family, member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 96 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGACTGGGAG (5) 8.2 0.0082 P8 Cb GC AAGATCCTGA (11) 6.5 0.0065 P8 Cb GC CTGCACTGGG (3) 4.9 0.0049 P8 Cb GC TTTAATAATG (3) 3.3 0.0033 P8 Cb GC AGTTCAATTC (6) 1.6 0.0016 Cb medulloblastoma TGACTGGGAG (5) 92.5 0.0925 Cb medulloblastoma AAGATCCTGA (11) 2.3 0.0023 P8 GC+1d culture TGACTGGGAG (5) 14.8 0.0148 P8 GC+1d culture GGATAGCCAA (3) 2.3 0.0023 P8 GC+1d culture ACTTTTGGAT (2) 1.1 0.0011 P8 GC+1d culture TGAAGGAGAC (2) 1.1 0.0011 P8 GC+SHH+1d culture TGACTGGGAG (5) 4.7 0.0047 P8 GC+SHH+1d culture GGATAGCCAA (3) 3.5 0.0035 P8 GC+SHH+1d culture CAAGAAAAAA (7) 2.3 0.0023 P8 GC+SHH+1d culture CTGCACTGGG (3) 2.3 0.0023 P8 GC+SHH+1d culture TGAAGGAGAC (2) 2.3 0.0023 P8 GC+SHH+1d culture AAGATCCTGA (11) 1.2 0.0012 P8 GC+SHH+1d culture ACTTTTGGAT (2) 1.2 0.0012 P8 GC+SHH+1d culture TCTATCACTG (3) 1.2 0.0012 3T3 fibroblasts AAGATCCTGA (11) 3.5 0.0035 3T3 fibroblasts TGACTGGGAG (5) 3.5 0.0035 E15 cortex AAGATCCTGA (11) 4.9 0.0049 E15 cortex CAAGAAAAAA (7) 4.9 0.0049 E15 cortex GGATAGCCAA (3) 4.9 0.0049 E15 cortex TGAAGGAGAC (2) 4.9 0.0049 P1 cortex AGTTCAATTC (6) 4.5 0.0045 Hypothalamus TGACTGGGAG (5) 86.9 0.0869 Hypothalamus TTTAATAATG (3) 7.2 0.0072 Hypothalamus AAGATCCTGA (11) 1.8 0.0018 Hypothalamus GCTGAGGTTT (2) 1.8 0.0018 Hypothalamus GGATAGCCAA (3) 1.8 0.0018 E12.5 retina TGACTGGGAG (5) 5.6 0.0056 E12.5 retina AGTTCAATTC (6) 1.9 0.0019 E12.5 retina TCTATCACTG (3) 1.9 0.0019 E14.5 retina CTGCACTGGG (3) 5.5 0.0055 E14.5 retina GGATAGCCAA (3) 3.6 0.0036 E14.5 retina TGACTGGGAG (5) 3.6 0.0036 E14.5 retina AAGATCCTGA (11) 1.8 0.0018 E14.5 retina TTTAATAATG (3) 1.8 0.0018 E16.5 retina GGATAGCCAA (3) 5.4 0.0054 E16.5 retina CTGCACTGGG (3) 3.6 0.0036 E16.5 retina TGACTGGGAG (5) 3.6 0.0036 E16.5 retina GCTGAGGTTT (2) 1.8 0.0018 E16.5 retina TCTATCACTG (3) 1.8 0.0018 E16.5 retina TGAAGGAGAC (2) 1.8 0.0018 E18.5 retina GGATAGCCAA (3) 9.1 0.0091 E18.5 retina TGAAGGAGAC (2) 3.6 0.0036 E18.5 retina ACTTTTGGAT (2) 1.8 0.0018 E18.5 retina CTGCACTGGG (3) 1.8 0.0018 E18.5 retina TCTATCACTG (3) 1.8 0.0018 E18.5 retina TGACTGGGAG (5) 1.8 0.0018 P0.5 retina CTGCACTGGG (3) 3.9 0.0039 P0.5 retina GGATAGCCAA (3) 3.9 0.0039 P0.5 retina TGACTGGGAG (5) 3.9 0.0039 P0.5 retina AGTTCAATTC (6) 2 0.002 P0.5 retina TCTATCACTG (3) 2 0.002 P0.5 retina TGAAGGAGAC (2) 2 0.002 P0.5 retina TTTAATAATG (3) 2 0.002 P2.5 retina TGACTGGGAG (5) 15.8 0.0158 P2.5 retina GGATAGCCAA (3) 5.3 0.0053 P2.5 retina TGAAGGAGAC (2) 5.3 0.0053 P2.5 retina TTTAATAATG (3) 3.5 0.0035 P2.5 retina AGTTCAATTC (6) 1.8 0.0018 P2.5 retina CTGCACTGGG (3) 1.8 0.0018 P4.5 retina TGACTGGGAG (5) 13.9 0.0139 P4.5 retina TGAAGGAGAC (2) 5.9 0.0059 P4.5 retina AGTTCAATTC (6) 4 0.004 P4.5 retina AGCAGCTCCT (3) 2 0.002 P4.5 retina TTTAATAATG (3) 2 0.002 P6.5 retina TGACTGGGAG (5) 26.7 0.0267 P6.5 retina TGAAGGAGAC (2) 3.3 0.0033 P6.5 retina TTTAATAATG (3) 3.3 0.0033 P6.5 retina AGCAGCTCCT (3) 1.7 0.0017 P6.5 retina GCTGAGGTTT (2) 1.7 0.0017 P10.5 crx- retina TGACTGGGAG (5) 24.2 0.0242 P10.5 crx- retina TTTAATAATG (3) 7.4 0.0074 P10.5 crx- retina GGATAGCCAA (3) 3.7 0.0037 P10.5 crx- retina AGCAGCTCCT (3) 1.9 0.0019 P10.5 crx- retina AGTTCAATTC (6) 1.9 0.0019 P10.5 crx- retina TGAAGGAGAC (2) 1.9 0.0019 P10.5 crx+ retina TGACTGGGAG (5) 32.7 0.0327 P10.5 crx+ retina AGCAGCTCCT (3) 17.3 0.0173 P10.5 crx+ retina GGATAGCCAA (3) 3.8 0.0038 P10.5 crx+ retina TGAAGGAGAC (2) 3.8 0.0038 P10.5 crx+ retina TTTAATAATG (3) 3.8 0.0038 Adult retinal TGACTGGGAG (5) 33.3 0.0333 Adult retinal AGCAGCTCCT (3) 9.3 0.0093 Adult retinal GGATAGCCAA (3) 1.9 0.0019 ONL TGACTGGGAG (5) 34.5 0.0345 ONL AGCAGCTCCT (3) 17.2 0.0172 ONL AGTTCAATTC (6) 7.7 0.0077 ONL GGATAGCCAA (3) 7.7 0.0077 ONL CAAGAAAAAA (7) 3.8 0.0038 ONL ACTTTTGGAT (2) 1.9 0.0019 ONL CTGCACTGGG (3) 1.9 0.0019 ONL TTTAATAATG (3) 1.9 0.0019