Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.278221
BC062185
cDNA sequence BC062185
10
215112
Human Homolog
C6orf61[chromosome 6 open reading frame 61]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 50 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCCCTGCGC (
14
)
21.2
0.0212
P8 Cb GC
TGGGTTTAGA (
5
)
16.3
0.0163
Cb medulloblastoma
TGGGTTTAGA (
5
)
16.2
0.0162
Cb medulloblastoma
GCCCCTGCGC (
14
)
6.9
0.0069
P8 GC+1d culture
GCCCCTGCGC (
14
)
46.8
0.0468
P8 GC+1d culture
TGGGTTTAGA (
5
)
9.1
0.0091
P8 GC+SHH+1d culture
GCCCCTGCGC (
14
)
21.1
0.0211
P8 GC+SHH+1d culture
TGGGTTTAGA (
5
)
21.1
0.0211
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
E15 cortex
TGGGTTTAGA (
5
)
4.9
0.0049
P1 cortex
GCCCCTGCGC (
14
)
4.5
0.0045
Hypothalamus
TGGGTTTAGA (
5
)
38
0.038
Hypothalamus
GCCCTGGGTT (
7
)
3.6
0.0036
E12.5 retina
TGGGTTTAGA (
5
)
35.7
0.0357
E12.5 retina
GCCCCTGCGC (
14
)
7.5
0.0075
E14.5 retina
TGGGTTTAGA (
5
)
54.7
0.0547
E14.5 retina
GAGAAGATGA
(
4
)
3.6
0.0036
E14.5 retina
GCCCCTGCGC (
14
)
1.8
0.0018
E14.5 retina
GCCCTGGGTT (
7
)
1.8
0.0018
E16.5 retina
TGGGTTTAGA (
5
)
54.3
0.0543
E16.5 retina
GAGAAGATGA
(
4
)
1.8
0.0018
E16.5 retina
GCCCCTGCGC (
14
)
1.8
0.0018
E18.5 retina
TGGGTTTAGA (
5
)
83.7
0.0837
E18.5 retina
GCCCCTGCGC (
14
)
7.3
0.0073
E18.5 retina
GCCCTGGGTT (
7
)
3.6
0.0036
E18.5 retina
GAGAAGATGA
(
4
)
1.8
0.0018
P0.5 retina
TGGGTTTAGA (
5
)
25.5
0.0255
P0.5 retina
GCCCCTGCGC (
14
)
5.9
0.0059
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P2.5 retina
TGGGTTTAGA (
5
)
63.4
0.0634
P2.5 retina
GCCCCTGCGC (
14
)
1.8
0.0018
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
TGGGTTTAGA (
5
)
45.6
0.0456
P4.5 retina
GCCCCTGCGC (
14
)
5.9
0.0059
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
TGGGTTTAGA (
5
)
36.7
0.0367
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P10.5 crx- retina
TGGGTTTAGA (
5
)
9.3
0.0093
P10.5 crx- retina
GCCCCTGCGC (
14
)
1.9
0.0019
P10.5 crx+ retina
TGGGTTTAGA (
5
)
25
0.025
P10.5 crx+ retina
GCCCCTGCGC (
14
)
3.8
0.0038
P10.5 crx+ retina
GAGAAGATGA
(
4
)
1.9
0.0019
Adult retinal
TGGGTTTAGA (
5
)
24.1
0.0241
Adult retinal
GCCCCTGCGC (
14
)
11.1
0.0111
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
ONL
TGGGTTTAGA (
5
)
11.5
0.0115
ONL
GCCCCTGCGC (
14
)
5.7
0.0057
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
GCCCTGGGTT (
7
)
3.8
0.0038
