Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.281732
Ehbp1
EH domain binding protein 1
11
11 11.0 cM
216565
Mm.281732
A830051L15Rik
RIKEN cDNA A830051L15 gene
11
320205
Mm.281732
A730093K11Rik
RIKEN cDNA A730093K11 gene
11
320565
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 49 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGCAAGTACC (
4
)
3.3
0.0033
P8 Cb GC
ATTTTTTTTC (
20
)
3.3
0.0033
P8 Cb GC
ATTTTTTTTT
(
36
)
1.6
0.0016
Cb medulloblastoma
ATTTTTTTTC (
20
)
9.2
0.0092
Cb medulloblastoma
AGCAAGTACC (
4
)
2.3
0.0023
Cb medulloblastoma
GCAAACTTTA (
6
)
2.3
0.0023
Cb medulloblastoma
TGTGTTTGTG (
12
)
2.3
0.0023
P8 GC+1d culture
TGTGTTTGTG (
12
)
5.7
0.0057
P8 GC+1d culture
ATTTTTTTTC (
20
)
3.4
0.0034
P8 GC+1d culture
ATTTTTTTTT
(
36
)
1.1
0.0011
P8 GC+SHH+1d culture
ATTTTTTTTC (
20
)
4.7
0.0047
P8 GC+SHH+1d culture
ATTTTTTTTT
(
36
)
3.5
0.0035
P8 GC+SHH+1d culture
TGTGTTTGTG (
12
)
2.3
0.0023
E15 cortex
ATTTTTTTTC (
20
)
4.9
0.0049
P1 cortex
ATTTTTTTTC (
20
)
40.9
0.0409
P1 cortex
TGTGTTTGTG (
12
)
9.1
0.0091
P1 cortex
ATTTTTTTTT
(
36
)
4.5
0.0045
Hypothalamus
ATTTTTTTTC (
20
)
1.8
0.0018
E12.5 retina
ATTTTTTTTC (
20
)
9.4
0.0094
E12.5 retina
TGTGTTTGTG (
12
)
1.9
0.0019
E14.5 retina
ATTTTTTTTC (
20
)
5.5
0.0055
E14.5 retina
ATTTTTTTTT
(
36
)
1.8
0.0018
E14.5 retina
GCAAACTTTA (
6
)
1.8
0.0018
E16.5 retina
ATTTTTTTTC (
20
)
9.1
0.0091
E16.5 retina
TGTGTTTGTG (
12
)
3.6
0.0036
E16.5 retina
GCAAACTTTA (
6
)
1.8
0.0018
E18.5 retina
ATTTTTTTTC (
20
)
7.3
0.0073
E18.5 retina
ATTTTTTTTT
(
36
)
1.8
0.0018
P0.5 retina
TGTGTTTGTG (
12
)
7.9
0.0079
P0.5 retina
ATTTTTTTTC (
20
)
3.9
0.0039
P0.5 retina
ATTTTTTTTT
(
36
)
3.9
0.0039
P2.5 retina
ATTTTTTTTC (
20
)
8.8
0.0088
P2.5 retina
ATTCCGAAGA (
5
)
3.5
0.0035
P2.5 retina
ATTTTTTTTT
(
36
)
3.5
0.0035
P2.5 retina
TGTGTTTGTG (
12
)
3.5
0.0035
P4.5 retina
ATTTTTTTTT
(
36
)
4
0.004
P4.5 retina
ATTTTTTTTC (
20
)
2
0.002
P4.5 retina
CAGGTAGAAC
(
6
)
2
0.002
P6.5 retina
TGTGTTTGTG (
12
)
8.3
0.0083
P6.5 retina
ATTTTTTTTC (
20
)
6.7
0.0067
P10.5 crx- retina
TGTGTTTGTG (
12
)
3.7
0.0037
P10.5 crx- retina
ATTCCGAAGA (
5
)
1.9
0.0019
P10.5 crx+ retina
TGTGTTTGTG (
12
)
5.8
0.0058
P10.5 crx+ retina
ATTTTTTTTC (
20
)
3.8
0.0038
Adult retinal
ATTTTTTTTC (
20
)
1.9
0.0019
Adult retinal
TGTGTTTGTG (
12
)
1.9
0.0019
ONL
CAGGTAGAAC
(
6
)
3.8
0.0038
ONL
ATTTTTTTTC (
20
)
1.9
0.0019
ONL
TGTGTTTGTG (
12
)
1.9
0.0019
