Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28300	Zdhhc3	zinc finger, DHHC domain containing 3	9		69035
Gene Ontology	cysteine-type endopeptidase activity | Golgi apparatus | integral to membrane | metal ion binding | protein targeting | proteolysis and peptidolysis
Human Homolog	ZDHHC3[zinc finger, DHHC domain containing 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 105 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTATTTT (14) 13.1 0.0131 P8 Cb GC GAAACAATGC 4.9 0.0049 P8 Cb GC TTTATTTTTA (6) 4.9 0.0049 P8 Cb GC TTTTATTTTT (12) 3.3 0.0033 P8 Cb GC GCACCTCCCA (4) 1.6 0.0016 P8 Cb GC GTCCTTCAGA (5) 1.6 0.0016 Cb medulloblastoma ACCGCTGCGT 4.6 0.0046 Cb medulloblastoma TTTTTATTTT (14) 4.6 0.0046 Cb medulloblastoma GAAACAATGC 2.3 0.0023 Cb medulloblastoma TTTATTTTTA (6) 2.3 0.0023 Cb medulloblastoma TTTTATTTTT (12) 2.3 0.0023 P8 GC+1d culture TTTTTATTTT (14) 9.1 0.0091 P8 GC+1d culture GAAACAATGC 4.6 0.0046 P8 GC+1d culture TTTATTTTTA (6) 4.6 0.0046 P8 GC+1d culture AGACCCTACC (4) 3.4 0.0034 P8 GC+1d culture TTTTATTTTT (12) 3.4 0.0034 P8 GC+1d culture ACCGCTGCGT 1.1 0.0011 P8 GC+1d culture CTAGAAAACC (2) 1.1 0.0011 P8 GC+1d culture GCACCTCCCA (4) 1.1 0.0011 P8 GC+SHH+1d culture TTTTTATTTT (14) 10.5 0.0105 P8 GC+SHH+1d culture GAAACAATGC 8.2 0.0082 P8 GC+SHH+1d culture TTTATTTTTA (6) 7 0.007 P8 GC+SHH+1d culture ACCGCTGCGT 4.7 0.0047 P8 GC+SHH+1d culture TTTTATTTTT (12) 4.7 0.0047 P8 GC+SHH+1d culture CTAGAAAACC (2) 3.5 0.0035 P8 GC+SHH+1d culture GTCCTTCAGA (5) 1.2 0.0012 3T3 fibroblasts CTAGAAAACC (2) 3.5 0.0035 3T3 fibroblasts GAAACAATGC 3.5 0.0035 3T3 fibroblasts GCACCTCCCA (4) 3.5 0.0035 E15 cortex ACCGCTGCGT 4.9 0.0049 E15 cortex GCAGCTCCCA (2) 4.9 0.0049 E15 cortex GTCCTTCAGA (5) 4.9 0.0049 E15 cortex TGGAAGCAGT (3) 4.9 0.0049 E15 cortex TTTATTTTTA (6) 4.9 0.0049 P1 cortex GAAACAATGC 4.5 0.0045 Hypothalamus GAAACAATGC 7.2 0.0072 Hypothalamus TTTTTATTTT (14) 5.4 0.0054 Hypothalamus TTTTATTTTT (12) 3.6 0.0036 Hypothalamus CTAGAAAACC (2) 1.8 0.0018 E12.5 retina TTTTATTTTT (12) 7.5 0.0075 E12.5 retina GAAACAATGC 3.8 0.0038 E12.5 retina GCAGCTCCCA (2) 1.9 0.0019 E12.5 retina GTCCTTCAGA (5) 1.9 0.0019 E12.5 retina TTTTTATTTT (14) 1.9 0.0019 E14.5 retina GAAACAATGC 10.9 0.0109 E14.5 retina TTTATTTTTA (6) 5.5 0.0055 E14.5 retina GCACCTCCCA (4) 3.6 0.0036 E14.5 retina TTTTATTTTT (12) 3.6 0.0036 E14.5 retina GTCCTTCAGA (5) 1.8 0.0018 E14.5 retina TGGAAGCAGT (3) 1.8 0.0018 E14.5 retina TTTTTATTTT (14) 1.8 0.0018 E16.5 retina TTTTATTTTT (12) 3.6 0.0036 E16.5 retina TTTTTATTTT (14) 3.6 0.0036 E16.5 retina ACCGCTGCGT 1.8 0.0018 E16.5 retina GAAACAATGC 1.8 0.0018 E16.5 retina TTTATTTTTA (6) 1.8 0.0018 E18.5 retina TTTTATTTTT (12) 12.7 0.0127 E18.5 retina TTTATTTTTA (6) 7.3 0.0073 E18.5 retina ACCGCTGCGT 3.6 0.0036 E18.5 retina CTAGAAAACC (2) 3.6 0.0036 E18.5 retina TTTTTATTTT (14) 3.6 0.0036 E18.5 retina GAAACAATGC 1.8 0.0018 E18.5 retina TGGAAGCACT (7) 1.8 0.0018 E18.5 retina TGGAAGCAGT (3) 1.8 0.0018 P0.5 retina GAAACAATGC 9.8 0.0098 P0.5 retina TTTTATTTTT (12) 7.9 0.0079 P0.5 retina AGACCCTACC (4) 2 0.002 P0.5 retina TTTATTTTTA (6) 2 0.002 P0.5 retina TTTTTATTTT (14) 2 0.002 P2.5 retina TTTTATTTTT (12) 5.3 0.0053 P2.5 retina TTTTTATTTT (14) 5.3 0.0053 P2.5 retina GAAACAATGC 3.5 0.0035 P2.5 retina TTTATTTTTA (6) 3.5 0.0035 P2.5 retina ACCGCTGCGT 1.8 0.0018 P2.5 retina GCACCTCCCA (4) 1.8 0.0018 P4.5 retina GAAACAATGC 17.8 0.0178 P4.5 retina TTTATTTTTA (6) 11.9 0.0119 P4.5 retina TTTTTATTTT (14) 4 0.004 P4.5 retina ACCGCTGCGT 2 0.002 P4.5 retina CTAGAAAACC (2) 2 0.002 P4.5 retina TGGAAGCACT (7) 2 0.002 P4.5 retina TTTTATTTTT (12) 2 0.002 P6.5 retina GAAACAATGC 5 0.005 P6.5 retina TTTATTTTTA (6) 5 0.005 P6.5 retina TTTTTATTTT (14) 5 0.005 P6.5 retina TGGAAGCACT (7) 1.7 0.0017 P6.5 retina TTTTATTTTT (12) 1.7 0.0017 P10.5 crx- retina TTTTTATTTT (14) 3.7 0.0037 P10.5 crx- retina ACCGCTGCGT 1.9 0.0019 P10.5 crx- retina GTCCTTCAGA (5) 1.9 0.0019 P10.5 crx- retina TTTTATTTTT (12) 1.9 0.0019 P10.5 crx+ retina GAAACAATGC 9.6 0.0096 P10.5 crx+ retina TTTTATTTTT (12) 5.8 0.0058 P10.5 crx+ retina TTTTTATTTT (14) 5.8 0.0058 P10.5 crx+ retina ACCGCTGCGT 1.9 0.0019 P10.5 crx+ retina GCAGCTCCCA (2) 1.9 0.0019 P10.5 crx+ retina TGGAAGCACT (7) 1.9 0.0019 Adult retinal CTAGAAAACC (2) 3.7 0.0037 Adult retinal TTTTTATTTT (14) 3.7 0.0037 Adult retinal GAAACAATGC 1.9 0.0019 ONL TTTTATTTTT (12) 3.8 0.0038 ONL GAAACAATGC 1.9 0.0019 ONL GCACCTCCCA (4) 1.9 0.0019 ONL TTTATTTTTA (6) 1.9 0.0019 ONL TTTTTATTTT (14) 1.9 0.0019