Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28643	Vamp2	vesicle-associated membrane protein 2	11		22318
Gene Ontology	calcium ion dependent exocytosis | calmodulin binding | integral to membrane | phospholipid binding | regulation of exocytosis | secretory granule | SNARE binding | synapse | synaptic vesicle | synaptic vesicle exocytosis | synaptic vesicle membrane | synaptosome | zymogen granule membrane
Human Homolog	VAMP2[vesicle-associated membrane protein 2 (synaptobrevin 2)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCCCAATTC (2) 11.4 0.0114 P8 Cb GC TTCAAGAAGT (5) 1.6 0.0016 Cb medulloblastoma CCCCCAATTC (2) 34.7 0.0347 Cb medulloblastoma GGGCAGGGGA (5) 9.2 0.0092 Cb medulloblastoma TGGGGCACTC 2.3 0.0023 Cb medulloblastoma TTCAAGAAGT (5) 2.3 0.0023 Cb medulloblastoma TTGATTAGCA 2.3 0.0023 P8 GC+1d culture CCCCCAATTC (2) 18.3 0.0183 P8 GC+1d culture TTCTGTGTAT (6) 2.3 0.0023 P8 GC+1d culture TTGATTAGCA 2.3 0.0023 P8 GC+1d culture AGCGCACACC 1.1 0.0011 P8 GC+1d culture GGGCAGGGGA (5) 1.1 0.0011 P8 GC+1d culture TGGGGCACTC 1.1 0.0011 P8 GC+1d culture TTTGTGAAAA (6) 1.1 0.0011 P8 GC+SHH+1d culture CCCCCAATTC (2) 11.7 0.0117 P8 GC+SHH+1d culture TTCAAGAAGT (5) 3.5 0.0035 P8 GC+SHH+1d culture TTCTGTGTAT (6) 2.3 0.0023 P8 GC+SHH+1d culture TTTGTGAAAA (6) 2.3 0.0023 P8 GC+SHH+1d culture AGCGCACACC 1.2 0.0012 P8 GC+SHH+1d culture TGGGGCACTC 1.2 0.0012 P8 GC+SHH+1d culture TTGATTAGCA 1.2 0.0012 E15 cortex CCCCCAATTC (2) 14.8 0.0148 E15 cortex TTTGTGAAAA (6) 4.9 0.0049 P1 cortex CCCCCAATTC (2) 18.2 0.0182 P1 cortex CCCCCAATTT (2) 4.5 0.0045 P1 cortex TTTGTGAAAA (6) 4.5 0.0045 Hypothalamus GGGCAGGGGA (5) 30.8 0.0308 Hypothalamus CCCCCAATTC (2) 19.9 0.0199 Hypothalamus TTGATTAGCA 12.7 0.0127 Hypothalamus TGGGGCACTC 3.6 0.0036 Hypothalamus CCCCCAATTT (2) 1.8 0.0018 Hypothalamus TTCTGTGTAT (6) 1.8 0.0018 Hypothalamus TTGGAAGCTC 1.8 0.0018 E12.5 retina CCCCCAATTC (2) 5.6 0.0056 E12.5 retina TTTGTGAAAA (6) 1.9 0.0019 E14.5 retina CCCCCAATTC (2) 7.3 0.0073 E14.5 retina GGGCAGGGGA (5) 1.8 0.0018 E14.5 retina TTTGTGAAAA (6) 1.8 0.0018 E16.5 retina CCCCCAATTC (2) 18.1 0.0181 E16.5 retina GGGCAGGGGA (5) 1.8 0.0018 E18.5 retina CCCCCAATTC (2) 14.6 0.0146 E18.5 retina GGGCAGGGGA (5) 3.6 0.0036 E18.5 retina TTTGTGAAAA (6) 3.6 0.0036 P0.5 retina CCCCCAATTC (2) 9.8 0.0098 P0.5 retina CCCCCAATTT (2) 2 0.002 P0.5 retina TTGATTAGCA 2 0.002 P2.5 retina CCCCCAATTC (2) 21.1 0.0211 P2.5 retina TTCAAGAAGT (5) 14.1 0.0141 P2.5 retina GGGCAGGGGA (5) 5.3 0.0053 P2.5 retina CCCCCAATTT (2) 1.8 0.0018 P2.5 retina TTGATTAGCA 1.8 0.0018 P4.5 retina CCCCCAATTC (2) 13.9 0.0139 P4.5 retina TTTGTGAAAA (6) 7.9 0.0079 P4.5 retina GGGCAGGGGA (5) 4 0.004 P4.5 retina TTCAAGAAGT (5) 4 0.004 P4.5 retina AGCGCACACC 2 0.002 P4.5 retina TTGATTAGCA 2 0.002 P6.5 retina CCCCCAATTC (2) 65 0.065 P6.5 retina GGGCAGGGGA (5) 5 0.005 P6.5 retina TTGATTAGCA 5 0.005 P6.5 retina CCCCCAATTT (2) 3.3 0.0033 P6.5 retina TTTGTGAAAA (6) 3.3 0.0033 P6.5 retina TTCAAGAAGT (5) 1.7 0.0017 P6.5 retina TTGGAAGCTC 1.7 0.0017 P10.5 crx- retina CCCCCAATTC (2) 57.6 0.0576 P10.5 crx- retina CCCCCAATTT (2) 1.9 0.0019 P10.5 crx- retina GGGCAGGGGA (5) 1.9 0.0019 P10.5 crx- retina TGGGGCACTC 1.9 0.0019 P10.5 crx- retina TTCTGTGTAT (6) 1.9 0.0019 P10.5 crx- retina TTGATTAGCA 1.9 0.0019 P10.5 crx+ retina CCCCCAATTC (2) 61.5 0.0615 P10.5 crx+ retina CCCCCAATTT (2) 3.8 0.0038 P10.5 crx+ retina GGGCAGGGGA (5) 1.9 0.0019 P10.5 crx+ retina TTGATTAGCA 1.9 0.0019 Adult retinal CCCCCAATTC (2) 59.2 0.0592 Adult retinal CCCCCAATTT (2) 7.4 0.0074 Adult retinal GGGCAGGGGA (5) 7.4 0.0074 Adult retinal TGGGGCACTC 3.7 0.0037 ONL CCCCCAATTC (2) 13.4 0.0134 ONL TTGATTAGCA 11.5 0.0115 ONL TTGGAAGCTC 5.7 0.0057 ONL TTCAAGAAGT (5) 1.9 0.0019