Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28683	Tfrc	transferrin receptor	16	16 21.2 cM	22042
Gene Ontology	endocytosis | endosome | endosome | integral to membrane | iron ion homeostasis | iron ion transporter activity | peptidase activity | plasma membrane | proteolysis and peptidolysis | receptor activity | transferrin receptor activity
Human Homolog	TFRC[transferrin receptor (p90, CD71)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 96 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCTTGACTT (5) 16.3 0.0163 P8 Cb GC AATTCCCAAC (3) 4.9 0.0049 P8 Cb GC ACCTTTACTG 4.9 0.0049 P8 Cb GC AGTGGCTACC (2) 1.6 0.0016 P8 Cb GC GAAACAGAGG (4) 1.6 0.0016 P8 Cb GC GGGGCCCTGG (11) 1.6 0.0016 Cb medulloblastoma TTCTTGACTT (5) 9.2 0.0092 Cb medulloblastoma CATTTTACAT (2) 6.9 0.0069 Cb medulloblastoma AATTCCCAAC (3) 2.3 0.0023 Cb medulloblastoma AGTGGCTACC (2) 2.3 0.0023 Cb medulloblastoma GAGGCTGGAA (3) 2.3 0.0023 Cb medulloblastoma GGGGCCCTGG (11) 2.3 0.0023 P8 GC+1d culture TTCTTGACTT (5) 26.3 0.0263 P8 GC+1d culture CATTTTACAT (2) 4.6 0.0046 P8 GC+1d culture ACCTTTACTG 2.3 0.0023 P8 GC+1d culture CTAATTTTTG (2) 2.3 0.0023 P8 GC+1d culture AATTCCCAAC (3) 1.1 0.0011 P8 GC+SHH+1d culture TTCTTGACTT (5) 17.6 0.0176 P8 GC+SHH+1d culture ACCTTTACTG 7 0.007 P8 GC+SHH+1d culture CATTTTACAT (2) 4.7 0.0047 P8 GC+SHH+1d culture AAAATGTCAA (8) 3.5 0.0035 P8 GC+SHH+1d culture AAGAAAATTA (3) 1.2 0.0012 3T3 fibroblasts ACCTTTACTG 3.5 0.0035 3T3 fibroblasts AGTGGCTACC (2) 3.5 0.0035 E15 cortex AATTCCCAAC (3) 4.9 0.0049 E15 cortex ACCTTTACTG 4.9 0.0049 E15 cortex AGTGGCTACC (2) 4.9 0.0049 E15 cortex GCAAAACTGA (6) 4.9 0.0049 E15 cortex TTCTTGACTT (5) 4.9 0.0049 P1 cortex ACCTTTACTG 9.1 0.0091 P1 cortex AAAATGTCAA (8) 4.5 0.0045 P1 cortex AAGAAAATTA (3) 4.5 0.0045 P1 cortex GCAAAACTGA (6) 4.5 0.0045 P1 cortex TTCTTGACTT (5) 4.5 0.0045 Hypothalamus TTCTTGACTT (5) 9.1 0.0091 Hypothalamus CATTTTACAT (2) 5.4 0.0054 Hypothalamus CTAATTTTTG (2) 3.6 0.0036 Hypothalamus AATTCCCAAC (3) 1.8 0.0018 Hypothalamus ACCTTTACTG 1.8 0.0018 Hypothalamus GGGGCCCTGG (11) 1.8 0.0018 E12.5 retina TTCTTGACTT (5) 11.3 0.0113 E12.5 retina ACCTTTACTG 3.8 0.0038 E12.5 retina AGTGGCTACC (2) 1.9 0.0019 E12.5 retina GAAACAGAGG (4) 1.9 0.0019 E14.5 retina TTCTTGACTT (5) 23.7 0.0237 E14.5 retina ACCTTTACTG 1.8 0.0018 E14.5 retina CATTTTACAT (2) 1.8 0.0018 E14.5 retina GGGGCCCTGG (11) 1.8 0.0018 E16.5 retina TTCTTGACTT (5) 18.1 0.0181 E16.5 retina ACCTTTACTG 1.8 0.0018 E16.5 retina CATTTTACAT (2) 1.8 0.0018 E16.5 retina CTAATTTTTG (2) 1.8 0.0018 E18.5 retina TTCTTGACTT (5) 14.6 0.0146 E18.5 retina AAAATGTCAA (8) 1.8 0.0018 P0.5 retina TTCTTGACTT (5) 9.8 0.0098 P0.5 retina CATTTTACAT (2) 3.9 0.0039 P0.5 retina ACCTTTACTG 2 0.002 P2.5 retina TTCTTGACTT (5) 8.8 0.0088 P2.5 retina CTAATTTTTG (2) 5.3 0.0053 P2.5 retina AAAATGTCAA (8) 1.8 0.0018 P2.5 retina AAGAAAATTA (3) 1.8 0.0018 P4.5 retina TTCTTGACTT (5) 13.9 0.0139 P4.5 retina ACCTTTACTG 2 0.002 P4.5 retina CATTTTACAT (2) 2 0.002 P4.5 retina GGGGCCCTGG (11) 2 0.002 P6.5 retina TTCTTGACTT (5) 23.3 0.0233 P6.5 retina ACCTTTACTG 6.7 0.0067 P6.5 retina CATTTTACAT (2) 5 0.005 P6.5 retina AAAATGTCAA (8) 3.3 0.0033 P6.5 retina CTAATTTTTG (2) 1.7 0.0017 P10.5 crx- retina CATTTTACAT (2) 14.9 0.0149 P10.5 crx- retina TTCTTGACTT (5) 13 0.013 P10.5 crx- retina AAAATGTCAA (8) 1.9 0.0019 P10.5 crx- retina ACCTTTACTG 1.9 0.0019 P10.5 crx+ retina AAAATGTCAA (8) 5.8 0.0058 P10.5 crx+ retina ACCTTTACTG 5.8 0.0058 P10.5 crx+ retina GCAAAACTGA (6) 3.8 0.0038 P10.5 crx+ retina CATTTTACAT (2) 1.9 0.0019 P10.5 crx+ retina CTAATTTTTG (2) 1.9 0.0019 P10.5 crx+ retina GGGGCCCTGG (11) 1.9 0.0019 P10.5 crx+ retina TTCTTGACTT (5) 1.9 0.0019 Adult retinal TTCTTGACTT (5) 9.3 0.0093 Adult retinal CATTTTACAT (2) 7.4 0.0074 Adult retinal CTAATTTTTG (2) 5.6 0.0056 Adult retinal AAAATGTCAA (8) 3.7 0.0037 Adult retinal ACCTTTACTG 3.7 0.0037 Adult retinal AGTGGCTACC (2) 1.9 0.0019 Adult retinal GAAACAGAGG (4) 1.9 0.0019 Adult retinal GGGGCCCTGG (11) 1.9 0.0019 ONL CTAATTTTTG (2) 13.4 0.0134 ONL AAAATGTCAA (8) 3.8 0.0038 ONL GAGGCTGGAA (3) 3.8 0.0038 ONL ACCTTTACTG 1.9 0.0019 ONL CATTTTACAT (2) 1.9 0.0019 ONL GCAAAACTGA (6) 1.9 0.0019 ONL TTCTTGACTT (5) 1.9 0.0019