Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.287267	4933430H15Rik	RIKEN cDNA 4933430H15 gene	3		74485
Mm.287267	Arhgef11	Rho guanine nucleotide exchange factor (GEF) 11	3		213498
Gene Ontology	guanyl-nucleotide exchange factor activity
Human Homolog	ARHGEF11[Rho guanine nucleotide exchange factor (GEF) 11]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTGTTTATG (4) 151.7 0.1517 P8 Cb GC GAGGGACTTG (6) 3.3 0.0033 P8 Cb GC GTTAAGATTT (4) 3.3 0.0033 P8 Cb GC TCCCTGGCTG (5) 1.6 0.0016 Cb medulloblastoma ATTGTTTATG (4) 6.9 0.0069 Cb medulloblastoma GCTTTGGCTT (7) 2.3 0.0023 Cb medulloblastoma GTTAAGATTT (4) 2.3 0.0023 P8 GC+1d culture ATTGTTTATG (4) 77.6 0.0776 P8 GC+1d culture GTTAAGATTT (4) 1.1 0.0011 P8 GC+SHH+1d culture ATTGTTTATG (4) 179.1 0.1791 P8 GC+SHH+1d culture GAGGGACTTG (6) 4.7 0.0047 P8 GC+SHH+1d culture GCTTTGGCTT (7) 2.3 0.0023 3T3 fibroblasts ATTGTTTATG (4) 10.5 0.0105 3T3 fibroblasts GCTTTGGCTT (7) 7 0.007 E15 cortex ATTGTTTATG (4) 9.9 0.0099 E15 cortex GCTTTGGCTT (7) 9.9 0.0099 P1 cortex ATTGTTTATG (4) 22.7 0.0227 P1 cortex GAGGGACTTG (6) 4.5 0.0045 P1 cortex GTTAAGATTT (4) 4.5 0.0045 Hypothalamus ATTGTTTATG (4) 14.5 0.0145 Hypothalamus GAGGGACTTG (6) 3.6 0.0036 Hypothalamus GTTAAGATTT (4) 3.6 0.0036 E12.5 retina ATTGTTTATG (4) 159.6 0.1596 E14.5 retina ATTGTTTATG (4) 242.3 0.2423 E14.5 retina GTTAAGATTT (4) 1.8 0.0018 E16.5 retina ATTGTTTATG (4) 170.2 0.1702 E16.5 retina GCTTTGGCTT (7) 1.8 0.0018 E16.5 retina GTTAAGATTT (4) 1.8 0.0018 E18.5 retina ATTGTTTATG (4) 351.1 0.3511 E18.5 retina GTTAAGATTT (4) 7.3 0.0073 P0.5 retina ATTGTTTATG (4) 186.4 0.1864 P0.5 retina GTTAAGATTT (4) 3.9 0.0039 P0.5 retina GCTTTGGCTT (7) 2 0.002 P2.5 retina ATTGTTTATG (4) 325.6 0.3256 P2.5 retina GTTAAGATTT (4) 3.5 0.0035 P2.5 retina GAGGGACTTG (6) 1.8 0.0018 P4.5 retina ATTGTTTATG (4) 410.1 0.4101 P4.5 retina GAGGGACTTG (6) 2 0.002 P4.5 retina GTTAAGATTT (4) 2 0.002 P4.5 retina TCCCTGGCTG (5) 2 0.002 P6.5 retina ATTGTTTATG (4) 405.2 0.4052 P6.5 retina GTTAAGATTT (4) 6.7 0.0067 P6.5 retina GAGGGACTTG (6) 1.7 0.0017 P6.5 retina GCTTTGGCTT (7) 1.7 0.0017 P6.5 retina TCCCTGGCTG (5) 1.7 0.0017 P10.5 crx- retina ATTGTTTATG (4) 159.8 0.1598 P10.5 crx- retina GAGGGACTTG (6) 5.6 0.0056 P10.5 crx- retina GTTAAGATTT (4) 5.6 0.0056 P10.5 crx- retina GCTTTGGCTT (7) 3.7 0.0037 P10.5 crx+ retina ATTGTTTATG (4) 151.9 0.1519 P10.5 crx+ retina GAGGGACTTG (6) 3.8 0.0038 Adult retinal ATTGTTTATG (4) 35.2 0.0352 ONL ATTGTTTATG (4) 99.6 0.0996 ONL GTTAAGATTT (4) 1.9 0.0019 ONL TCCCTGGCTG (5) 1.9 0.0019