Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28777
Pls3
plastin 3 (T-isoform)
X
102866
Gene Ontology
actin binding
|
calcium ion binding
Human Homolog
PLS3[plastin 3 (T isoform)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 103 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATAAAAAAAA (
33
)
11.4
0.0114
P8 Cb GC
TTCAAGAAGA (
3
)
9.8
0.0098
P8 Cb GC
ACACTTTTTG (
3
)
6.5
0.0065
P8 Cb GC
GATATTTTTT (
6
)
6.5
0.0065
P8 Cb GC
TAAACTGGGT (
2
)
3.3
0.0033
Cb medulloblastoma
ATAAAAAAAA (
33
)
25.4
0.0254
Cb medulloblastoma
TAAACTGGGT (
2
)
16.2
0.0162
Cb medulloblastoma
ACACTTTTTG (
3
)
9.2
0.0092
Cb medulloblastoma
TTCAAGAAGA (
3
)
6.9
0.0069
Cb medulloblastoma
GATATTTTTT (
6
)
2.3
0.0023
P8 GC+1d culture
GATATTTTTT (
6
)
36.5
0.0365
P8 GC+1d culture
ACACTTTTTG (
3
)
8
0.008
P8 GC+1d culture
TAAACTGGGT (
2
)
8
0.008
P8 GC+1d culture
ATAAAAAAAA (
33
)
5.7
0.0057
P8 GC+1d culture
CCACTTTTGA
(
2
)
4.6
0.0046
P8 GC+1d culture
ACACTTTTGA
2.3
0.0023
P8 GC+1d culture
TTCAAGAAGA (
3
)
2.3
0.0023
P8 GC+SHH+1d culture
GATATTTTTT (
6
)
25.8
0.0258
P8 GC+SHH+1d culture
ATAAAAAAAA (
33
)
21.1
0.0211
P8 GC+SHH+1d culture
TAAACTGGGT (
2
)
8.2
0.0082
P8 GC+SHH+1d culture
ACACTTTTTG (
3
)
5.9
0.0059
P8 GC+SHH+1d culture
CCACTTTTGA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TTCAAGAAGA (
3
)
1.2
0.0012
E15 cortex
GATATTTTTT (
6
)
14.8
0.0148
E15 cortex
TTCAAGAAGA (
3
)
9.9
0.0099
E15 cortex
ACACTTTTTG (
3
)
4.9
0.0049
P1 cortex
ACACTTTTTG (
3
)
9.1
0.0091
P1 cortex
GATATTTTTT (
6
)
9.1
0.0091
P1 cortex
TAAACTGGGT (
2
)
9.1
0.0091
P1 cortex
TTCAAGAAGA (
3
)
9.1
0.0091
Hypothalamus
ATAAAAAAAA (
33
)
7.2
0.0072
Hypothalamus
TAAACTGGGT (
2
)
7.2
0.0072
Hypothalamus
GATATTTTTT (
6
)
3.6
0.0036
Hypothalamus
TTCAAGAAGA (
3
)
3.6
0.0036
Hypothalamus
ACACTTTTTG (
3
)
1.8
0.0018
E12.5 retina
ATAAAAAAAA (
33
)
11.3
0.0113
E12.5 retina
GATATTTTTT (
6
)
7.5
0.0075
E12.5 retina
TAAACTGGGT (
2
)
5.6
0.0056
E12.5 retina
ACACTTTTTG (
3
)
3.8
0.0038
E12.5 retina
GAATTTGGCT (
12
)
1.9
0.0019
E12.5 retina
TTCAAGAAGA (
3
)
1.9
0.0019
E14.5 retina
ATAAAAAAAA (
33
)
16.4
0.0164
E14.5 retina
GATATTTTTT (
6
)
10.9
0.0109
E14.5 retina
TTCAAGAAGA (
3
)
9.1
0.0091
E14.5 retina
ACACTTTTGA
1.8
0.0018
E14.5 retina
CCACTTTTGA
(
2
)
1.8
0.0018
E14.5 retina
TAAACTGGGT (
2
)
1.8
0.0018
E16.5 retina
GATATTTTTT (
6
)
10.9
0.0109
E16.5 retina
TTCAAGAAGA (
3
)
7.2
0.0072
E16.5 retina
ATAAAAAAAA (
33
)
5.4
0.0054
E16.5 retina
ACACTTTTTG (
3
)
3.6
0.0036
E16.5 retina
TAAACTGGGT (
2
)
1.8
0.0018
E18.5 retina
ATAAAAAAAA (
33
)
30.9
0.0309
E18.5 retina
GATATTTTTT (
6
)
12.7
0.0127
E18.5 retina
ACACTTTTTG (
3
)
3.6
0.0036
E18.5 retina
TAAACTGGGT (
2
)
3.6
0.0036
E18.5 retina
CACTTTTGCA (
5
)
1.8
0.0018
E18.5 retina
TTCAAGAAGA (
3
)
1.8
0.0018
P0.5 retina
GATATTTTTT (
6
)
7.9
0.0079
P0.5 retina
ACACTTTTTG (
3
)
3.9
0.0039
P0.5 retina
CCACTTTTGA
(
2
)
3.9
0.0039
P0.5 retina
TTCAAGAAGA (
3
)
3.9
0.0039
P0.5 retina
ATAAAAAAAA (
33
)
2
0.002
P0.5 retina
TAAACTGGGT (
2
)
2
0.002
P2.5 retina
ATAAAAAAAA (
33
)
14.1
0.0141
P2.5 retina
GATATTTTTT (
6
)
12.3
0.0123
P2.5 retina
ACACTTTTTG (
3
)
5.3
0.0053
P2.5 retina
CACTTTTGCA (
5
)
5.3
0.0053
P2.5 retina
TTCAAGAAGA (
3
)
5.3
0.0053
P2.5 retina
GAATTTGGCT (
12
)
3.5
0.0035
P2.5 retina
TAAACTGGGT (
2
)
3.5
0.0035
P2.5 retina
ACACTTTTGA
1.8
0.0018
P2.5 retina
CCACTTTTGA
(
2
)
1.8
0.0018
P4.5 retina
ATAAAAAAAA (
33
)
21.8
0.0218
P4.5 retina
GATATTTTTT (
6
)
13.9
0.0139
P4.5 retina
ACACTTTTTG (
3
)
5.9
0.0059
P4.5 retina
CCACTTTTGA
(
2
)
5.9
0.0059
P4.5 retina
TTCAAGAAGA (
3
)
4
0.004
P6.5 retina
ATAAAAAAAA (
33
)
10
0.01
P6.5 retina
TTCAAGAAGA (
3
)
6.7
0.0067
P6.5 retina
GATATTTTTT (
6
)
5
0.005
P6.5 retina
TAAACTGGGT (
2
)
3.3
0.0033
P6.5 retina
CACTTTTGCA (
5
)
1.7
0.0017
P10.5 crx- retina
ATAAAAAAAA (
33
)
5.6
0.0056
P10.5 crx- retina
CCACTTTTGA
(
2
)
5.6
0.0056
P10.5 crx- retina
ACACTTTTTG (
3
)
3.7
0.0037
P10.5 crx- retina
TAAACTGGGT (
2
)
3.7
0.0037
P10.5 crx- retina
TTCAAGAAGA (
3
)
1.9
0.0019
P10.5 crx+ retina
ACACTTTTTG (
3
)
9.6
0.0096
P10.5 crx+ retina
GATATTTTTT (
6
)
5.8
0.0058
P10.5 crx+ retina
TTCAAGAAGA (
3
)
5.8
0.0058
P10.5 crx+ retina
ATAAAAAAAA (
33
)
3.8
0.0038
P10.5 crx+ retina
TAAACTGGGT (
2
)
3.8
0.0038
P10.5 crx+ retina
CACTTTTGCA (
5
)
1.9
0.0019
Adult retinal
GATATTTTTT (
6
)
9.3
0.0093
Adult retinal
TAAACTGGGT (
2
)
5.6
0.0056
Adult retinal
ACACTTTTGA
1.9
0.0019
Adult retinal
CCACTTTTGA
(
2
)
1.9
0.0019
ONL
GATATTTTTT (
6
)
7.7
0.0077
ONL
ATAAAAAAAA (
33
)
1.9
0.0019
ONL
CCACTTTTGA
(
2
)
1.9
0.0019
ONL
TAAACTGGGT (
2
)
1.9
0.0019
ONL
TTCAAGAAGA (
3
)
1.9
0.0019
