Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.289702	Syt1	synaptotagmin 1	10	10 D1 (10 58.0 cM)	20979
Mm.289702	5330428N10Rik	RIKEN cDNA 5330428N10 gene	10		78277
Mm.289702	6430709C05Rik	RIKEN cDNA 6430709C05 gene	10		76240
Mm.289702	A130086K04Rik	RIKEN cDNA A130086K04 gene	10		319988
Mm.289702	2900074G08Rik	RIKEN cDNA 2900074G08 gene	10		72989
Mm.289702	C030018G05Rik	RIKEN cDNA C030018G05 gene	10		77388
Mm.289702	C030044C18Rik	RIKEN cDNA C030044C18 gene	10		77637
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 3 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 76 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGACCTCAA (10) 1.6 0.0016 P8 Cb GC GGGTTGGCCG (9) 1.6 0.0016 Cb medulloblastoma GACACTCAAT (8) 92.5 0.0925 Cb medulloblastoma GGGTTGGCCG (9) 6.9 0.0069 Cb medulloblastoma AGCCGGTGAC (7) 2.3 0.0023 Cb medulloblastoma CTGACCTCAA (10) 2.3 0.0023 Cb medulloblastoma GGTTCACTCT (12) 2.3 0.0023 P8 GC+1d culture GACACTCAAT (8) 9.1 0.0091 P8 GC+1d culture GCTGCTGCTG (21) 2.3 0.0023 P8 GC+1d culture GGAGATGATA (8) 1.1 0.0011 P8 GC+SHH+1d culture GACACTCAAT (8) 11.7 0.0117 P8 GC+SHH+1d culture AAGTCAGATG (9) 1.2 0.0012 P8 GC+SHH+1d culture GGGTTCACTA (9) 1.2 0.0012 P8 GC+SHH+1d culture GGGTTGGCCG (9) 1.2 0.0012 P8 GC+SHH+1d culture GTAGTTTTCT (9) 1.2 0.0012 3T3 fibroblasts CATCCTGATA (8) 3.5 0.0035 3T3 fibroblasts TTGGCCAGGA (9) 3.5 0.0035 E15 cortex GACACTCAAT (8) 9.9 0.0099 E15 cortex GGGTTGGCCG (9) 4.9 0.0049 P1 cortex GACACTCAAT (8) 22.7 0.0227 Hypothalamus GACACTCAAT (8) 88.7 0.0887 Hypothalamus TAATATGTTA (8) 5.4 0.0054 Hypothalamus AAAACCTGAA (10) 1.8 0.0018 Hypothalamus AAGTCAGATG (9) 1.8 0.0018 Hypothalamus GGAGATGATA (8) 1.8 0.0018 Hypothalamus GGGTTCACTA (9) 1.8 0.0018 Hypothalamus GTAGTTTTCT (9) 1.8 0.0018 E12.5 retina GACACTCAAT (8) 3.8 0.0038 E14.5 retina GACACTCAAT (8) 14.6 0.0146 E14.5 retina CATCCTGATA (8) 3.6 0.0036 E14.5 retina AAAACCTGAA (10) 1.8 0.0018 E14.5 retina CTGACCTCAA (10) 1.8 0.0018 E14.5 retina GGTTCACTCT (12) 1.8 0.0018 E16.5 retina GACACTCAAT (8) 10.9 0.0109 E16.5 retina CTGACCTCAA (10) 3.6 0.0036 E16.5 retina GGGTTCACTA (9) 3.6 0.0036 E16.5 retina AGCCGGTGAC (7) 1.8 0.0018 E16.5 retina GGGTTGGCCG (9) 1.8 0.0018 E16.5 retina TAATATGTTA (8) 1.8 0.0018 E18.5 retina GACACTCAAT (8) 27.3 0.0273 E18.5 retina AAAAGATGAA (8) 1.8 0.0018 E18.5 retina CTGACCTCAA (10) 1.8 0.0018 E18.5 retina GGGTTCACTA (9) 1.8 0.0018 P0.5 retina GACACTCAAT (8) 5.9 0.0059 P0.5 retina AAAACCTGAA (10) 2 0.002 P0.5 retina AAGTCAGATG (9) 2 0.002 P0.5 retina GCTGCTGCTG (21) 2 0.002 P2.5 retina GACACTCAAT (8) 40.5 0.0405 P4.5 retina GACACTCAAT (8) 61.4 0.0614 P4.5 retina AAAAGATGAA (8) 2 0.002 P4.5 retina AAGTCAGATG (9) 2 0.002 P4.5 retina CTGACCTCAA (10) 2 0.002 P4.5 retina GGAGATGATA (8) 2 0.002 P6.5 retina GACACTCAAT (8) 66.7 0.0667 P6.5 retina GGGTTCACTA (9) 10 0.01 P6.5 retina CATCCTGATA (8) 1.7 0.0017 P6.5 retina GCTGCTGCTG (21) 1.7 0.0017 P6.5 retina GGGTTGGCCG (9) 1.7 0.0017 P6.5 retina GGTTCACTCT (12) 1.7 0.0017 P10.5 crx- retina GACACTCAAT (8) 31.6 0.0316 P10.5 crx- retina GGGTTCACTA (9) 3.7 0.0037 P10.5 crx- retina GGGTTGGCCG (9) 1.9 0.0019 P10.5 crx- retina TTCTGAGCAG (9) 1.9 0.0019 P10.5 crx+ retina GACACTCAAT (8) 115.3 0.1153 P10.5 crx+ retina GGGTTCACTA (9) 9.6 0.0096 P10.5 crx+ retina AAGTCAGATG (9) 1.9 0.0019 P10.5 crx+ retina TTGGCCAGGA (9) 1.9 0.0019 Adult retinal GACACTCAAT (8) 51.8 0.0518 Adult retinal GGGTTGGCCG (9) 11.1 0.0111 Adult retinal AGCCGGTGAC (7) 1.9 0.0019 Adult retinal CTGACCTCAA (10) 1.9 0.0019 Adult retinal GGAGATGATA (8) 1.9 0.0019 Adult retinal GGGTTCACTA (9) 1.9 0.0019 ONL GACACTCAAT (8) 82.4 0.0824 ONL GTAGTTTTCT (9) 3.8 0.0038 ONL AAAAGATGAA (8) 1.9 0.0019