Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290022	Eif4b	eukaryotic translation initiation factor 4B	15		75705
Gene Ontology	eukaryotic translation initiation factor 4F complex | nucleic acid binding | protein biosynthesis | regulation of translational initiation | RNA binding | translation initiation factor activity
Human Homolog	EIF4B[eukaryotic translation initiation factor 4B]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 107 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAATTTGT (4) 14.7 0.0147 P8 Cb GC GAGCAGAAAA (2) 4.9 0.0049 P8 Cb GC TTTTCAAAAA (9) 3.3 0.0033 P8 Cb GC AAGCAGGGAA (9) 1.6 0.0016 P8 Cb GC GACCGCTATG (2) 1.6 0.0016 P8 Cb GC GCGGCTGCAG (2) 1.6 0.0016 Cb medulloblastoma TTTTCAAAAA (9) 13.9 0.0139 Cb medulloblastoma GCTGCTGCCA (7) 4.6 0.0046 Cb medulloblastoma GAGCAGAAAA (2) 2.3 0.0023 Cb medulloblastoma TAAAATTTGT (4) 2.3 0.0023 Cb medulloblastoma TAGAGGTCAG (4) 2.3 0.0023 P8 GC+1d culture TTTTCAAAAA (9) 37.7 0.0377 P8 GC+1d culture TAAAATTTGT (4) 13.7 0.0137 P8 GC+1d culture GAGCAGAAAA (2) 6.8 0.0068 P8 GC+1d culture AAGAGGGCAA (5) 2.3 0.0023 P8 GC+1d culture GACCGCTATG (2) 2.3 0.0023 P8 GC+1d culture GGGGCTCCCC (3) 1.1 0.0011 P8 GC+1d culture TAAATTTGTA (4) 1.1 0.0011 P8 GC+SHH+1d culture TTTTCAAAAA (9) 19.9 0.0199 P8 GC+SHH+1d culture TAAAATTTGT (4) 18.7 0.0187 P8 GC+SHH+1d culture GAGCAGAAAA (2) 8.2 0.0082 P8 GC+SHH+1d culture AGATGACCAC (4) 1.2 0.0012 P8 GC+SHH+1d culture CTGCTCCTGC (16) 1.2 0.0012 P8 GC+SHH+1d culture CTGCTGCAGC (7) 1.2 0.0012 P8 GC+SHH+1d culture GACCGCTATG (2) 1.2 0.0012 3T3 fibroblasts GCTGCTGCCA (7) 35 0.035 3T3 fibroblasts GACCGCTATG (2) 7 0.007 3T3 fibroblasts TTTTCAAAAA (9) 3.5 0.0035 E15 cortex AAGCAGGGAA (9) 4.9 0.0049 E15 cortex CTGCTCCTGC (16) 4.9 0.0049 E15 cortex GAGCAGAAAA (2) 4.9 0.0049 P1 cortex TAAAATTTGT (4) 9.1 0.0091 P1 cortex TAAATTTGTA (4) 4.5 0.0045 Hypothalamus TTTTCAAAAA (9) 7.2 0.0072 Hypothalamus TAAAATTTGT (4) 5.4 0.0054 Hypothalamus GACCGCTATG (2) 3.6 0.0036 Hypothalamus GGGGTCTCAG (3) 3.6 0.0036 Hypothalamus AAGCAGGGAA (9) 1.8 0.0018 Hypothalamus GCCTGAGGAC (2) 1.8 0.0018 Hypothalamus GCTGCTGCCA (7) 1.8 0.0018 Hypothalamus TAGAGGTCAG (4) 1.8 0.0018 E12.5 retina GCTGCTGCCA (7) 5.6 0.0056 E12.5 retina TAAAATTTGT (4) 3.8 0.0038 E12.5 retina TTTTCAAAAA (9) 3.8 0.0038 E12.5 retina AAGCAGGGAA (9) 1.9 0.0019 E12.5 retina GACCGCTATG (2) 1.9 0.0019 E12.5 retina GAGCAGAAAA (2) 1.9 0.0019 E12.5 retina GCGGCTGCAG (2) 1.9 0.0019 E14.5 retina GAGCAGAAAA (2) 9.1 0.0091 E14.5 retina TAAAATTTGT (4) 7.3 0.0073 E14.5 retina TTTTCAAAAA (9) 5.5 0.0055 E14.5 retina AGATGACCAC (4) 1.8 0.0018 E14.5 retina CTGCTCCTGC (16) 1.8 0.0018 E14.5 retina CTGCTGCAGC (7) 1.8 0.0018 E14.5 retina GCGGCTGCAG (2) 1.8 0.0018 E14.5 retina GCTGCTGCCA (7) 1.8 0.0018 E14.5 retina TAAATTTGTA (4) 1.8 0.0018 E16.5 retina GAGCAGAAAA (2) 10.9 0.0109 E16.5 retina TAAAATTTGT (4) 3.6 0.0036 E16.5 retina GCCTGAGGAC (2) 1.8 0.0018 E16.5 retina GCTGCTGCCA (7) 1.8 0.0018 E16.5 retina GGGGTCTCAG (3) 1.8 0.0018 E18.5 retina TAAAATTTGT (4) 10.9 0.0109 E18.5 retina GAGCAGAAAA (2) 3.6 0.0036 E18.5 retina GCTGCTGCCA (7) 3.6 0.0036 E18.5 retina AAGCAGGGAA (9) 1.8 0.0018 E18.5 retina GCCTGAGGAC (2) 1.8 0.0018 E18.5 retina GCGGGCTCAC (2) 1.8 0.0018 E18.5 retina TTTTCAAAAA (9) 1.8 0.0018 P0.5 retina GAGCAGAAAA (2) 9.8 0.0098 P0.5 retina TAAAATTTGT (4) 7.9 0.0079 P0.5 retina GACCGCTATG (2) 3.9 0.0039 P0.5 retina GCGGGCTCAC (2) 2 0.002 P2.5 retina TAAAATTTGT (4) 8.8 0.0088 P2.5 retina GAGCAGAAAA (2) 3.5 0.0035 P2.5 retina GCTGCTGCCA (7) 3.5 0.0035 P2.5 retina AGATGACCAC (4) 1.8 0.0018 P2.5 retina CTGCTGCAGC (7) 1.8 0.0018 P2.5 retina TTTTCAAAAA (9) 1.8 0.0018 P4.5 retina TAAAATTTGT (4) 17.8 0.0178 P4.5 retina GAGCAGAAAA (2) 4 0.004 P4.5 retina CTGCTGCAGC (7) 2 0.002 P4.5 retina GCGGGCTCAC (2) 2 0.002 P6.5 retina TAAAATTTGT (4) 5 0.005 P6.5 retina GCGGGCTCAC (2) 3.3 0.0033 P6.5 retina TTTGTGGCCC (2) 3.3 0.0033 P10.5 crx- retina GAGCAGAAAA (2) 5.6 0.0056 P10.5 crx- retina TAAAATTTGT (4) 3.7 0.0037 P10.5 crx- retina TTTTCAAAAA (9) 3.7 0.0037 P10.5 crx- retina AAGAGGGCAA (5) 1.9 0.0019 P10.5 crx- retina AAGCAGGGAA (9) 1.9 0.0019 P10.5 crx- retina GGGGCTCCCC (3) 1.9 0.0019 P10.5 crx- retina GGGGTCTCAG (3) 1.9 0.0019 P10.5 crx- retina TTTGTGGCCC (2) 1.9 0.0019 P10.5 crx+ retina GCTGCTGCCA (7) 1.9 0.0019 Adult retinal GAGCAGAAAA (2) 3.7 0.0037 Adult retinal TAAAATTTGT (4) 3.7 0.0037 Adult retinal TTTGTGGCCC (2) 3.7 0.0037 Adult retinal GCCTGAGGAC (2) 1.9 0.0019 Adult retinal GCGGGCTCAC (2) 1.9 0.0019 Adult retinal GCTGCTGCCA (7) 1.9 0.0019 Adult retinal TAGAGGTCAG (4) 1.9 0.0019 Adult retinal TTTTCAAAAA (9) 1.9 0.0019 ONL TAAAATTTGT (4) 5.7 0.0057 ONL GAGCAGAAAA (2) 1.9 0.0019 ONL TTTGTGGCCC (2) 1.9 0.0019 ONL TTTTCAAAAA (9) 1.9 0.0019