Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.290070
Trappc6b
trafficking protein particle complex 6B
12
78232
Gene Ontology
endoplasmic reticulum
|
Golgi apparatus
|
transport
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 33 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CATTACTGTC
(
2
)
14.7
0.0147
Cb medulloblastoma
CATTACTGTC
(
2
)
23.1
0.0231
Cb medulloblastoma
ACAGAAACTG
(
4
)
2.3
0.0023
P8 GC+1d culture
CATTACTGTC
(
2
)
11.4
0.0114
P8 GC+1d culture
ACAGAAACTG
(
4
)
1.1
0.0011
P8 GC+1d culture
GTCAAAGGAC
1.1
0.0011
P8 GC+SHH+1d culture
CATTACTGTC
(
2
)
10.5
0.0105
P8 GC+SHH+1d culture
TATTTATATA
(
4
)
1.2
0.0012
E15 cortex
CATTACTGTC
(
2
)
4.9
0.0049
P1 cortex
CATTACTGTC
(
2
)
18.2
0.0182
P1 cortex
TATTTATATA
(
4
)
9.1
0.0091
Hypothalamus
CATTACTGTC
(
2
)
18.1
0.0181
Hypothalamus
GTCAAAGGAC
1.8
0.0018
E12.5 retina
CATTACTGTC
(
2
)
3.8
0.0038
E12.5 retina
ACAGAAACTG
(
4
)
1.9
0.0019
E14.5 retina
CATTACTGTC
(
2
)
16.4
0.0164
E14.5 retina
TGGCTTAATC
(
3
)
3.6
0.0036
E16.5 retina
CATTACTGTC
(
2
)
7.2
0.0072
E16.5 retina
TATTTATATA
(
4
)
1.8
0.0018
E18.5 retina
CATTACTGTC
(
2
)
18.2
0.0182
E18.5 retina
TATTTATATA
(
4
)
1.8
0.0018
P0.5 retina
CATTACTGTC
(
2
)
9.8
0.0098
P2.5 retina
CATTACTGTC
(
2
)
7
0.007
P4.5 retina
CATTACTGTC
(
2
)
2
0.002
P4.5 retina
GTCAAAGGAC
2
0.002
P6.5 retina
CATTACTGTC
(
2
)
15
0.015
P10.5 crx- retina
CATTACTGTC
(
2
)
11.1
0.0111
P10.5 crx- retina
ACAGAAACTG
(
4
)
3.7
0.0037
P10.5 crx+ retina
CATTACTGTC
(
2
)
23.1
0.0231
P10.5 crx+ retina
TATTTATATA
(
4
)
5.8
0.0058
P10.5 crx+ retina
TGGCTTAATC
(
3
)
1.9
0.0019
Adult retinal
CATTACTGTC
(
2
)
18.5
0.0185
ONL
CATTACTGTC
(
2
)
3.8
0.0038
