Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290182	Git1	G protein-coupled receptor kinase-interactor 1	11		216963
Gene Ontology	protein binding
Human Homolog	GIT1[G protein-coupled receptor kinase interactor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 105 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC ACAAAAAAAA (31) 6.5 0.0065 P8 Cb GC TGCCACTTCT (2) 3.3 0.0033 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma ACAAAAAAAA (31) 34.7 0.0347 Cb medulloblastoma TGCCAAAAAA (4) 18.5 0.0185 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture ACAAAAAAAA (31) 5.7 0.0057 P8 GC+1d culture TGCCAAAAAA (4) 3.4 0.0034 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture ACAAAAAAAA (31) 14.1 0.0141 P8 GC+SHH+1d culture TGCCAAAAAA (4) 7 0.007 P8 GC+SHH+1d culture TGCCACTTCT (2) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex ACAAAAAAAA (31) 4.9 0.0049 E15 cortex TGCCAAAAAA (4) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex ACAAAAAAAA (31) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus ACAAAAAAAA (31) 10.9 0.0109 Hypothalamus TGCCACTTCT (2) 3.6 0.0036 Hypothalamus CTGAGGTCTT (3) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina CAAGAGCATC 5.6 0.0056 E12.5 retina ACAAAAAAAA (31) 1.9 0.0019 E12.5 retina TGCCAAAAAA (4) 1.9 0.0019 E12.5 retina TGCCACTTCT (2) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina ACAAAAAAAA (31) 5.5 0.0055 E14.5 retina TGCCACTTCT (2) 3.6 0.0036 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina ACACACGTTC 7.2 0.0072 E16.5 retina TGCCACTTCT (2) 3.6 0.0036 E16.5 retina ACAAAAAAAA (31) 1.8 0.0018 E16.5 retina TGCCAAAAAA (4) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina ACAAAAAAAA (31) 14.6 0.0146 E18.5 retina TGCCAAAAAA (4) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina ACAAAAAAAA (31) 5.9 0.0059 P0.5 retina CAAGAGCATC 2 0.002 P0.5 retina TGCCAAAAAA (4) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina ACAAAAAAAA (31) 5.3 0.0053 P2.5 retina CAAGAGCATC 1.8 0.0018 P2.5 retina CTGAGGTCTT (3) 1.8 0.0018 P2.5 retina TGCCAAAAAA (4) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina ACAAAAAAAA (31) 5.9 0.0059 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina CAAGAGCATC 5 0.005 P6.5 retina ACAAAAAAAA (31) 1.7 0.0017 P6.5 retina TGCCAAAAAA (4) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina ACAAAAAAAA (31) 1.9 0.0019 P10.5 crx- retina TGCCACTTCT (2) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina ACAAAAAAAA (31) 11.5 0.0115 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal TGCCAAAAAA (4) 3.7 0.0037 Adult retinal CAAGAGCATC 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL ACAAAAAAAA (31) 5.7 0.0057 ONL TGCCAAAAAA (4) 3.8 0.0038 ONL CAAGAGCATC 1.9 0.0019