Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29044
B230110O18Rik
RIKEN cDNA B230110O18 gene
14
77844
Mm.29044
AI448102
expressed sequence AI448102
14
328419
Mm.29044
5033406L14Rik
RIKEN cDNA 5033406L14 gene
14
75965
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 69 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTATTAAATA
(
4
)
8.2
0.0082
P8 Cb GC
TACAAATGTA (
5
)
1.6
0.0016
P8 Cb GC
TGACAGATGT (
5
)
1.6
0.0016
Cb medulloblastoma
TTTAAAAAAA (
34
)
6.9
0.0069
Cb medulloblastoma
TGCACTATGG
(
3
)
2.3
0.0023
P8 GC+1d culture
TACAAATGTA (
5
)
32
0.032
P8 GC+1d culture
CTATTAAATA
(
4
)
14.8
0.0148
P8 GC+1d culture
TGACAGATGT (
5
)
2.3
0.0023
P8 GC+1d culture
TGCACTATGG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TACAAATGTA (
5
)
17.6
0.0176
P8 GC+SHH+1d culture
CTATTAAATA
(
4
)
9.4
0.0094
P8 GC+SHH+1d culture
TTTAAAAAAA (
34
)
5.9
0.0059
P8 GC+SHH+1d culture
ATTACAGACA
(
6
)
1.2
0.0012
P8 GC+SHH+1d culture
GTAGGAAACA
(
3
)
1.2
0.0012
3T3 fibroblasts
TGCACTATGG
(
3
)
7
0.007
E15 cortex
CTATTAAATA
(
4
)
4.9
0.0049
P1 cortex
CTATTAAATA
(
4
)
9.1
0.0091
Hypothalamus
CTATTAAATA
(
4
)
10.9
0.0109
Hypothalamus
TTTAAAAAAA (
34
)
10.9
0.0109
Hypothalamus
TGCACTATGG
(
3
)
5.4
0.0054
Hypothalamus
TACAAATATG (
4
)
1.8
0.0018
E12.5 retina
CTATTAAATA
(
4
)
15
0.015
E12.5 retina
GGATTTGGGG
(
4
)
1.9
0.0019
E12.5 retina
TGACAGATGT (
5
)
1.9
0.0019
E12.5 retina
TTTAAAAAAA (
34
)
1.9
0.0019
E14.5 retina
CTATTAAATA
(
4
)
23.7
0.0237
E14.5 retina
TTTAAAAAAA (
34
)
9.1
0.0091
E14.5 retina
TGACAGATGT (
5
)
3.6
0.0036
E16.5 retina
CTATTAAATA
(
4
)
18.1
0.0181
E16.5 retina
TATAAATATT (
8
)
1.8
0.0018
E16.5 retina
TTTAAAAAAA (
34
)
1.8
0.0018
E18.5 retina
CTATTAAATA
(
4
)
21.8
0.0218
E18.5 retina
TTTAAAAAAA (
34
)
10.9
0.0109
E18.5 retina
GGATTTGGGG
(
4
)
1.8
0.0018
E18.5 retina
TGACAGATGT (
5
)
1.8
0.0018
P0.5 retina
CTATTAAATA
(
4
)
9.8
0.0098
P0.5 retina
TGCACTATGG
(
3
)
3.9
0.0039
P0.5 retina
ATTACAGACA
(
6
)
2
0.002
P0.5 retina
GTAGGAAACA
(
3
)
2
0.002
P0.5 retina
TGACAGATGT (
5
)
2
0.002
P0.5 retina
TTTAAAAAAA (
34
)
2
0.002
P2.5 retina
CTATTAAATA
(
4
)
15.8
0.0158
P2.5 retina
GTAGGAAACA
(
3
)
1.8
0.0018
P2.5 retina
TGACAGATGT (
5
)
1.8
0.0018
P2.5 retina
TTTAAAAAAA (
34
)
1.8
0.0018
P4.5 retina
CTATTAAATA
(
4
)
21.8
0.0218
P4.5 retina
TTTAAAAAAA (
34
)
5.9
0.0059
P4.5 retina
ATTACAGACA
(
6
)
2
0.002
P4.5 retina
TATAAATATT (
8
)
2
0.002
P6.5 retina
CTATTAAATA
(
4
)
13.3
0.0133
P6.5 retina
TACAAATATG (
4
)
6.7
0.0067
P6.5 retina
TTTAAAAAAA (
34
)
6.7
0.0067
P6.5 retina
ATTACAGACA
(
6
)
1.7
0.0017
P6.5 retina
TACAAATGTA (
5
)
1.7
0.0017
P6.5 retina
TGACAGATGT (
5
)
1.7
0.0017
P6.5 retina
TGCACTATGG
(
3
)
1.7
0.0017
P10.5 crx- retina
CTATTAAATA
(
4
)
13
0.013
P10.5 crx- retina
TACAAATATG (
4
)
9.3
0.0093
P10.5 crx- retina
ATTACAGACA
(
6
)
3.7
0.0037
P10.5 crx- retina
TACAAATGTA (
5
)
1.9
0.0019
P10.5 crx- retina
TATAAATATT (
8
)
1.9
0.0019
P10.5 crx+ retina
CTATTAAATA
(
4
)
9.6
0.0096
P10.5 crx+ retina
TACAAATATG (
4
)
7.7
0.0077
P10.5 crx+ retina
TGACAGATGT (
5
)
1.9
0.0019
Adult retinal
CTATTAAATA
(
4
)
1.9
0.0019
Adult retinal
TACAAATGTA (
5
)
1.9
0.0019
Adult retinal
TGCACTATGG
(
3
)
1.9
0.0019
ONL
TTTAAAAAAA (
34
)
7.7
0.0077
ONL
CTATTAAATA
(
4
)
5.7
0.0057
