Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.291179	Xrn1	5'-3' exoribonuclease 1	9		24127
Mm.291179	BC028454	cDNA sequence BC028454			407833
Mm.291179	A130001C09Rik	RIKEN cDNA A130001C09 gene	9		319802
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAGTCAC (4) 3.3 0.0033 Cb medulloblastoma CAAAAGTCAC (4) 4.6 0.0046 Cb medulloblastoma GGCTGTGGAA (4) 4.6 0.0046 Cb medulloblastoma TAAGTTTAAA (6) 2.3 0.0023 P8 GC+1d culture GGCTGTGGAA (4) 3.4 0.0034 P8 GC+1d culture CAAAAGTCAC (4) 2.3 0.0023 P8 GC+1d culture GGCCACAGTG (5) 2.3 0.0023 P8 GC+1d culture ACAAAAGAAT (10) 1.1 0.0011 P8 GC+1d culture TAACTATTTT (5) 1.1 0.0011 P8 GC+1d culture TAAGTTTAAA (6) 1.1 0.0011 P8 GC+SHH+1d culture GGCCACAGTG (5) 7 0.007 P8 GC+SHH+1d culture GGCTGTGGAA (4) 3.5 0.0035 P8 GC+SHH+1d culture TTCTGAGATT (4) 2.3 0.0023 P8 GC+SHH+1d culture CAAAAGTCAC (4) 1.2 0.0012 P8 GC+SHH+1d culture TAACTATTTT (5) 1.2 0.0012 3T3 fibroblasts GTGGAGCACA (9) 14 0.014 3T3 fibroblasts CAAAAGTCAC (4) 7 0.007 3T3 fibroblasts GGTCTGCCTG (4) 3.5 0.0035 P1 cortex GTGGAGCACA (9) 18.2 0.0182 P1 cortex GCAGCTTACA (10) 4.5 0.0045 Hypothalamus CAAAAGTCAC (4) 1.8 0.0018 Hypothalamus GGTCTGCCTG (4) 1.8 0.0018 E12.5 retina CAAAAGTCAC (4) 5.6 0.0056 E12.5 retina GGCCACAGTG (5) 3.8 0.0038 E12.5 retina GCAGCTTACA (10) 1.9 0.0019 E14.5 retina CAAAAGTCAC (4) 3.6 0.0036 E14.5 retina GCAGCTTACA (10) 3.6 0.0036 E14.5 retina TAACTATTTT (5) 1.8 0.0018 E14.5 retina TAAGTTTAAA (6) 1.8 0.0018 E18.5 retina CAAAAGTCAC (4) 5.5 0.0055 E18.5 retina GGCTGTGGAA (4) 5.5 0.0055 E18.5 retina GAAAGCAGAG (5) 3.6 0.0036 E18.5 retina GCAGCTTACA (10) 1.8 0.0018 E18.5 retina GGCCACAGTG (5) 1.8 0.0018 E18.5 retina TAAACCAGGC (3) 1.8 0.0018 P0.5 retina GCAGCTTACA (10) 7.9 0.0079 P0.5 retina GTGGAGCACA (9) 3.9 0.0039 P0.5 retina ACAAAAGAAT (10) 2 0.002 P0.5 retina CAAAAGTCAC (4) 2 0.002 P0.5 retina GGCTGTGGAA (4) 2 0.002 P2.5 retina GGCCACAGTG (5) 5.3 0.0053 P2.5 retina CAAAAGTCAC (4) 3.5 0.0035 P2.5 retina TAAATATACT (5) 3.5 0.0035 P2.5 retina ACAAAAGAAT (10) 1.8 0.0018 P4.5 retina GGCTGTGGAA (4) 5.9 0.0059 P4.5 retina CAAAAGTCAC (4) 4 0.004 P4.5 retina GCAGCTTACA (10) 2 0.002 P4.5 retina GGCCACAGTG (5) 2 0.002 P6.5 retina CAAAAGTCAC (4) 5 0.005 P6.5 retina GGCCACAGTG (5) 5 0.005 P6.5 retina GGCTGTGGAA (4) 3.3 0.0033 P6.5 retina GTGGAGCACA (9) 3.3 0.0033 P6.5 retina TAAATATACT (5) 3.3 0.0033 P6.5 retina GCAGCTTACA (10) 1.7 0.0017 P6.5 retina TAAACCAGGC (3) 1.7 0.0017 P6.5 retina TAAGTTTAAA (6) 1.7 0.0017 P10.5 crx- retina CAAAAGTCAC (4) 5.6 0.0056 P10.5 crx- retina GCAGCTTACA (10) 1.9 0.0019 P10.5 crx- retina TTCTGAGATT (4) 1.9 0.0019 P10.5 crx+ retina GCAGCTTACA (10) 5.8 0.0058 P10.5 crx+ retina GGCTGTGGAA (4) 3.8 0.0038 P10.5 crx+ retina CAAAAGTCAC (4) 1.9 0.0019 P10.5 crx+ retina GTGGAGCACA (9) 1.9 0.0019 Adult retinal CAAAAGTCAC (4) 5.6 0.0056 Adult retinal GGTCTGCCTG (4) 1.9 0.0019 Adult retinal GTGGAGCACA (9) 1.9 0.0019 ONL GCAGCTTACA (10) 1.9 0.0019 ONL GGCCACAGTG (5) 1.9 0.0019 ONL GGCTGTGGAA (4) 1.9 0.0019 ONL GTGGAGCACA (9) 1.9 0.0019