Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.291274
Rere
arginine glutamic acid dipeptide (RE) repeats
4
68703
Mm.291274
E230012J19Rik
RIKEN cDNA E230012J19 gene
4
319664
Mm.291274
9430064G09Rik
RIKEN cDNA 9430064G09 gene
4
319852
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 123 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGACCCTGTC (
35
)
6.5
0.0065
P8 Cb GC
GGATAGAAAG (
5
)
6.5
0.0065
P8 Cb GC
AGATAACACA
(
4
)
1.6
0.0016
P8 Cb GC
CCAGCCACAG (
7
)
1.6
0.0016
P8 Cb GC
GCAAACTACT
(
4
)
1.6
0.0016
P8 Cb GC
GGGCAGTAGG (
4
)
1.6
0.0016
P8 Cb GC
TACACACACA (
29
)
1.6
0.0016
P8 Cb GC
TTGGTGGAGG (
5
)
1.6
0.0016
Cb medulloblastoma
AGACCCTGTC (
35
)
20.8
0.0208
Cb medulloblastoma
GGATAGAAAG (
5
)
9.2
0.0092
Cb medulloblastoma
TGCAGTGGCA
(
4
)
4.6
0.0046
Cb medulloblastoma
TACACACACA (
29
)
2.3
0.0023
P8 GC+1d culture
AGACCCTGTC (
35
)
4.6
0.0046
P8 GC+1d culture
CCCCCACTTC (
7
)
4.6
0.0046
P8 GC+1d culture
GGATAGAAAG (
5
)
4.6
0.0046
P8 GC+1d culture
CCAGCCACAG (
7
)
3.4
0.0034
P8 GC+1d culture
GGGCAGTAGG (
4
)
3.4
0.0034
P8 GC+1d culture
AGATAACACA
(
4
)
2.3
0.0023
P8 GC+1d culture
CCACCACTTC
(
4
)
2.3
0.0023
P8 GC+1d culture
GAGCATTTTG (
5
)
2.3
0.0023
P8 GC+1d culture
GGGCAGCTAG
(
4
)
2.3
0.0023
P8 GC+1d culture
GTCCTGGGCT
(
5
)
1.1
0.0011
P8 GC+1d culture
TTGGTGGAGG (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
CCAGCCACAG (
7
)
3.5
0.0035
P8 GC+SHH+1d culture
CCCCCACTTC (
7
)
3.5
0.0035
P8 GC+SHH+1d culture
GGATAGAAAG (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
AGACCCTGTC (
35
)
1.2
0.0012
P8 GC+SHH+1d culture
AGATAACACA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
CCACCACTTC
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
CTGCTGCCCT (
16
)
1.2
0.0012
P8 GC+SHH+1d culture
TTGGTGGAGG (
5
)
1.2
0.0012
3T3 fibroblasts
GTCCTGGGCT
(
5
)
3.5
0.0035
E15 cortex
AGACCCTGTC (
35
)
14.8
0.0148
E15 cortex
GGATAGAAAG (
5
)
9.9
0.0099
E15 cortex
CCACCACTTC
(
4
)
4.9
0.0049
E15 cortex
CTGCTGCCCT (
16
)
4.9
0.0049
E15 cortex
TGCAGTGGCA
(
4
)
4.9
0.0049
E15 cortex
TTGGTGGAGG (
5
)
4.9
0.0049
P1 cortex
AGACCCTGTC (
35
)
4.5
0.0045
P1 cortex
CCAGCCACAG (
7
)
4.5
0.0045
P1 cortex
CTGCTGCCCT (
16
)
4.5
0.0045
Hypothalamus
GGATAGAAAG (
5
)
7.2
0.0072
Hypothalamus
TACACACACA (
29
)
7.2
0.0072
Hypothalamus
GGGCAGCTAG
(
4
)
5.4
0.0054
Hypothalamus
AGACCCTGTC (
35
)
1.8
0.0018
Hypothalamus
GTCCTGGGCT
(
5
)
1.8
0.0018
E12.5 retina
AGACCCTGTC (
35
)
5.6
0.0056
E12.5 retina
GGGCAGCTAG
(
4
)
5.6
0.0056
E12.5 retina
GGATAGAAAG (
5
)
3.8
0.0038
E12.5 retina
AAGGCTTGTT (
6
)
1.9
0.0019
E12.5 retina
CCACCACTTC
(
4
)
1.9
0.0019
E12.5 retina
CCAGCCACAG (
7
)
1.9
0.0019
E12.5 retina
CTGCTGCCCT (
16
)
1.9
0.0019
E12.5 retina
TACACACACA (
29
)
1.9
0.0019
E14.5 retina
AGACCCTGTC (
35
)
5.5
0.0055
E14.5 retina
TACACACACA (
29
)
5.5
0.0055
E14.5 retina
CTGCTGCCCT (
16
)
3.6
0.0036
E14.5 retina
CCAGCCACAG (
7
)
1.8
0.0018
E14.5 retina
CCCCCACTTC (
7
)
1.8
0.0018
E14.5 retina
GCAGCATTTG (
5
)
1.8
0.0018
E16.5 retina
CTGCTGCCCT (
16
)
5.4
0.0054
E16.5 retina
AGACCCTGTC (
35
)
3.6
0.0036
E16.5 retina
CCAGCCACAG (
7
)
3.6
0.0036
E16.5 retina
GCAGCATTTG (
5
)
3.6
0.0036
E16.5 retina
TACACACACA (
29
)
3.6
0.0036
E16.5 retina
CCACCACTTC
(
4
)
1.8
0.0018
E18.5 retina
AGACCCTGTC (
35
)
10.9
0.0109
E18.5 retina
CCACCACTTC
(
4
)
1.8
0.0018
E18.5 retina
CCAGCCACAG (
7
)
1.8
0.0018
E18.5 retina
GCAGCATTTG (
5
)
1.8
0.0018
E18.5 retina
GGATAGAAAG (
5
)
1.8
0.0018
E18.5 retina
TACACACACA (
29
)
1.8
0.0018
P0.5 retina
TACACACACA (
29
)
5.9
0.0059
P0.5 retina
CCACCACTTC
(
4
)
3.9
0.0039
P0.5 retina
GGATAGAAAG (
5
)
3.9
0.0039
P0.5 retina
AGACCCTGTC (
35
)
2
0.002
P0.5 retina
CCAGCCACAG (
7
)
2
0.002
P0.5 retina
CTGCTGCCCT (
16
)
2
0.002
P2.5 retina
AGACCCTGTC (
35
)
12.3
0.0123
P2.5 retina
GGATAGAAAG (
5
)
3.5
0.0035
P2.5 retina
GGGCAGCTAG
(
4
)
3.5
0.0035
P2.5 retina
CCAGCCACAG (
7
)
1.8
0.0018
P4.5 retina
AGACCCTGTC (
35
)
7.9
0.0079
P4.5 retina
TACACACACA (
29
)
4
0.004
P4.5 retina
CAGGCACAAC (
5
)
2
0.002
P4.5 retina
CTGCTGCCCT (
16
)
2
0.002
P4.5 retina
GAGCATTTTG (
5
)
2
0.002
P6.5 retina
AGACCCTGTC (
35
)
6.7
0.0067
P6.5 retina
CCACCACTTC
(
4
)
6.7
0.0067
P6.5 retina
GGATAGAAAG (
5
)
6.7
0.0067
P6.5 retina
TACACACACA (
29
)
3.3
0.0033
P6.5 retina
CCAGCCACAG (
7
)
1.7
0.0017
P6.5 retina
GGGCAGCTAG
(
4
)
1.7
0.0017
P10.5 crx- retina
AGATAACACA
(
4
)
20.4
0.0204
P10.5 crx- retina
CCAGCCACAG (
7
)
5.6
0.0056
P10.5 crx- retina
GCAAACTACT
(
4
)
3.7
0.0037
P10.5 crx- retina
GCAGCATTTG (
5
)
3.7
0.0037
P10.5 crx- retina
TACACACACA (
29
)
3.7
0.0037
P10.5 crx- retina
AAGGCTTGTT (
6
)
1.9
0.0019
P10.5 crx- retina
AGACCCTGTC (
35
)
1.9
0.0019
P10.5 crx- retina
CTGCTGCCCT (
16
)
1.9
0.0019
P10.5 crx- retina
GGATAGAAAG (
5
)
1.9
0.0019
P10.5 crx- retina
GGGCAGTAGG (
4
)
1.9
0.0019
P10.5 crx- retina
GTCCTGGGCT
(
5
)
1.9
0.0019
P10.5 crx+ retina
AGACCCTGTC (
35
)
11.5
0.0115
P10.5 crx+ retina
AGATAACACA
(
4
)
7.7
0.0077
P10.5 crx+ retina
GGGCAGTAGG (
4
)
5.8
0.0058
P10.5 crx+ retina
AAGGCTTGTT (
6
)
1.9
0.0019
P10.5 crx+ retina
GGATAGAAAG (
5
)
1.9
0.0019
P10.5 crx+ retina
GGGCAGCTAG
(
4
)
1.9
0.0019
P10.5 crx+ retina
TACACACACA (
29
)
1.9
0.0019
Adult retinal
AGACCCTGTC (
35
)
13
0.013
Adult retinal
CCAGCCACAG (
7
)
7.4
0.0074
Adult retinal
CCACCACTTC
(
4
)
5.6
0.0056
Adult retinal
TACACACACA (
29
)
5.6
0.0056
Adult retinal
CTGCTGCCCT (
16
)
1.9
0.0019
ONL
AGACCCTGTC (
35
)
17.2
0.0172
ONL
TACACACACA (
29
)
13.4
0.0134
ONL
CAGGCACAAC (
5
)
3.8
0.0038
ONL
CCAGCCACAG (
7
)
3.8
0.0038
ONL
AAGGCTTGTT (
6
)
1.9
0.0019
ONL
AGATAACACA
(
4
)
1.9
0.0019
ONL
GGATAGAAAG (
5
)
1.9
0.0019
