Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29151	Herpud1	homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	8		64209
Gene Ontology	endoplasmic reticulum | endoplasmic reticulum membrane | integral to membrane | response to stress | response to unfolded protein
Human Homolog	HERPUD1[homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTAGCAGGAC 8.2 0.0082 P8 Cb GC AAACTTTGTA 3.3 0.0033 P8 Cb GC GAGCCCGCCC (3) 3.3 0.0033 P8 Cb GC TTTGCACCTT (2) 3.3 0.0033 P8 Cb GC GGGGGCCCCC (6) 1.6 0.0016 P8 Cb GC TTGCTGCAGA (4) 1.6 0.0016 Cb medulloblastoma TTAGCAGGAC 11.6 0.0116 Cb medulloblastoma AAACTTTGTA 6.9 0.0069 Cb medulloblastoma GAGCCCGCCC (3) 4.6 0.0046 Cb medulloblastoma GTCCCAGGAC (2) 4.6 0.0046 P8 GC+1d culture AAACTTTGTA 5.7 0.0057 P8 GC+1d culture GTCCCAGGAC (2) 4.6 0.0046 P8 GC+1d culture TTAGCAGGAC 4.6 0.0046 P8 GC+1d culture TTTGCACCTT (2) 3.4 0.0034 P8 GC+1d culture GGGGGCCCCC (6) 2.3 0.0023 P8 GC+SHH+1d culture GTCCCAGGAC (2) 7 0.007 P8 GC+SHH+1d culture TTAGCAGGAC 4.7 0.0047 P8 GC+SHH+1d culture AAACTTTGTA 2.3 0.0023 P8 GC+SHH+1d culture TTTGCACCTT (2) 2.3 0.0023 P8 GC+SHH+1d culture GGGGGCCCCC (6) 1.2 0.0012 3T3 fibroblasts TTAGCAGGAC 7 0.007 3T3 fibroblasts GTCCCAGGAC (2) 3.5 0.0035 E15 cortex GTCCCAGGAC (2) 4.9 0.0049 P1 cortex AAACTTTGTA 4.5 0.0045 P1 cortex GTCCCAGGAC (2) 4.5 0.0045 Hypothalamus GTCCCAGGAC (2) 7.2 0.0072 Hypothalamus TTAGCAGGAC 7.2 0.0072 Hypothalamus GGGGGCCCCC (6) 1.8 0.0018 Hypothalamus TTTGCACCTT (2) 1.8 0.0018 E12.5 retina TTAGCAGGAC 7.5 0.0075 E12.5 retina TTTGCACCTT (2) 5.6 0.0056 E12.5 retina GTCCCAGGAC (2) 3.8 0.0038 E14.5 retina AAACTTTGTA 5.5 0.0055 E14.5 retina TTAGCAGGAC 3.6 0.0036 E16.5 retina TTAGCAGGAC 9.1 0.0091 E16.5 retina AAACTTTGTA 1.8 0.0018 E16.5 retina GTCCCAGGAC (2) 1.8 0.0018 E18.5 retina TTAGCAGGAC 10.9 0.0109 E18.5 retina AAACTTTGTA 5.5 0.0055 E18.5 retina GGGGGCCCCC (6) 3.6 0.0036 P0.5 retina TTAGCAGGAC 3.9 0.0039 P0.5 retina TTTGCACCTT (2) 3.9 0.0039 P0.5 retina AAACTTTGTA 2 0.002 P0.5 retina GTCCCAGGAC (2) 2 0.002 P2.5 retina TTAGCAGGAC 7 0.007 P2.5 retina AAACTTTGTA 1.8 0.0018 P2.5 retina GGGGGCCCCC (6) 1.8 0.0018 P2.5 retina TTGCTGCAGA (4) 1.8 0.0018 P4.5 retina TTAGCAGGAC 7.9 0.0079 P4.5 retina AAACTTTGTA 4 0.004 P4.5 retina GAGCCCGCCC (3) 2 0.002 P4.5 retina GGGGGCCCCC (6) 2 0.002 P4.5 retina TTTGCACCTT (2) 2 0.002 P6.5 retina AAACTTTGTA 5 0.005 P6.5 retina GTCCCAGGAC (2) 3.3 0.0033 P6.5 retina TTAGCAGGAC 3.3 0.0033 P10.5 crx- retina TTAGCAGGAC 11.1 0.0111 P10.5 crx- retina AAACTTTGTA 3.7 0.0037 P10.5 crx- retina GAGCCCGCCC (3) 3.7 0.0037 P10.5 crx- retina GTCCCAGGAC (2) 1.9 0.0019 P10.5 crx- retina TTTGCACCTT (2) 1.9 0.0019 P10.5 crx+ retina GTCCCAGGAC (2) 5.8 0.0058 P10.5 crx+ retina TTAGCAGGAC 5.8 0.0058 P10.5 crx+ retina AAACTTTGTA 1.9 0.0019 P10.5 crx+ retina GAGCCCGCCC (3) 1.9 0.0019 P10.5 crx+ retina TTGCTGCAGA (4) 1.9 0.0019 Adult retinal TTAGCAGGAC 9.3 0.0093 Adult retinal GTCCCAGGAC (2) 7.4 0.0074 Adult retinal AAACTTTGTA 1.9 0.0019 Adult retinal GAGCCCGCCC (3) 1.9 0.0019 Adult retinal GGGGGCCCCC (6) 1.9 0.0019 ONL TTAGCAGGAC 3.8 0.0038 ONL TTTGCACCTT (2) 3.8 0.0038 ONL AAACTTTGTA 1.9 0.0019