Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.292180	Garnl1	GTPase activating RANGAP domain-like 1	12		56784
Gene Ontology	cytoplasm | GTPase activator activity | nucleus | protein binding | Ran GTPase activator activity | regulation of transcription
Human Homolog	GARNL2P[GTPase activating Rap/RanGAP domain-like 2 pseudogene]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTATTTAATA (2) 4.9 0.0049 P8 Cb GC CTAGGCAAGC (18) 3.3 0.0033 Cb medulloblastoma GTATTTAATA (2) 4.6 0.0046 Cb medulloblastoma CTAGGCAAGC (18) 2.3 0.0023 Cb medulloblastoma TCTGACAAAG (4) 2.3 0.0023 P8 GC+1d culture GTATTTAATA (2) 4.6 0.0046 P8 GC+SHH+1d culture GTATTTAATA (2) 2.3 0.0023 P8 GC+SHH+1d culture TAATTTAAAA (4) 1.2 0.0012 P8 GC+SHH+1d culture TCTGACAAAG (4) 1.2 0.0012 3T3 fibroblasts GTATTTAATA (2) 3.5 0.0035 P1 cortex GTATTTAATA (2) 4.5 0.0045 P1 cortex TCTGACAAAG (4) 4.5 0.0045 Hypothalamus CTAGGCAAGC (18) 1.8 0.0018 Hypothalamus GTATTTAATA (2) 1.8 0.0018 Hypothalamus TCTGACAAAG (4) 1.8 0.0018 E12.5 retina GTATTTAATA (2) 1.9 0.0019 E12.5 retina TCTGACAAAG (4) 1.9 0.0019 E14.5 retina GTATTTAATA (2) 9.1 0.0091 E14.5 retina TCTGACAAAG (4) 1.8 0.0018 E16.5 retina GTATTTAATA (2) 7.2 0.0072 E16.5 retina CTAGGCAAGC (18) 1.8 0.0018 E16.5 retina TAATTTAAAA (4) 1.8 0.0018 E18.5 retina CTAGGCAAGC (18) 3.6 0.0036 E18.5 retina GTATTTAATA (2) 3.6 0.0036 E18.5 retina TCTGACAAAG (4) 1.8 0.0018 P2.5 retina GTATTTAATA (2) 5.3 0.0053 P2.5 retina CTAGGCAAGC (18) 3.5 0.0035 P4.5 retina GTATTTAATA (2) 9.9 0.0099 P6.5 retina GTATTTAATA (2) 6.7 0.0067 P6.5 retina CTAGGCAAGC (18) 1.7 0.0017 P6.5 retina TAATTTAAAA (4) 1.7 0.0017 P10.5 crx- retina GTATTTAATA (2) 5.6 0.0056 P10.5 crx- retina CTAGGCAAGC (18) 1.9 0.0019 P10.5 crx+ retina CTAGGCAAGC (18) 5.8 0.0058 P10.5 crx+ retina GTATTTAATA (2) 3.8 0.0038 P10.5 crx+ retina TCTGACAAAG (4) 1.9 0.0019 Adult retinal CTAGGCAAGC (18) 1.9 0.0019 ONL GTATTTAATA (2) 13.4 0.0134 ONL CTAGGCAAGC (18) 3.8 0.0038