Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.293233	Acat1	acetyl-Coenzyme A acetyltransferase 1	9	9 30.0 cM	110446
Gene Ontology	acetyl-CoA C-acetyltransferase activity | acyltransferase activity | mitochondrion | mitochondrion | transferase activity
Human Homolog	ACAT1[acetyl-Coenzyme A acetyltransferase 1 (acetoacetyl Coenzyme A thiolase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 98 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCAGGCTGCC (2) 107.7 0.1077 P8 Cb GC TGACCGGCTG 16.3 0.0163 P8 Cb GC TGGGAAGTAA 4.9 0.0049 P8 Cb GC GACTTCTATT 3.3 0.0033 P8 Cb GC CCCTGAAGCC (2) 1.6 0.0016 Cb medulloblastoma TCAGGCTGCC (2) 339.9 0.3399 Cb medulloblastoma GCTGCCCTGG (12) 6.9 0.0069 Cb medulloblastoma TGACCGGCTG 4.6 0.0046 Cb medulloblastoma CCCTGAAGCC (2) 2.3 0.0023 Cb medulloblastoma TGGGAAGTAA 2.3 0.0023 P8 GC+1d culture TCAGGCTGCC (2) 182.6 0.1826 P8 GC+1d culture TGACCGGCTG 18.3 0.0183 P8 GC+1d culture GACTTCTATT 4.6 0.0046 P8 GC+1d culture AGCCATATGA (2) 2.3 0.0023 P8 GC+1d culture GCTGCCCTGG (12) 2.3 0.0023 P8 GC+1d culture CCCTGAAGCC (2) 1.1 0.0011 P8 GC+SHH+1d culture TCAGGCTGCC (2) 233 0.233 P8 GC+SHH+1d culture TGACCGGCTG 11.7 0.0117 P8 GC+SHH+1d culture GACTTCTATT 5.9 0.0059 P8 GC+SHH+1d culture GCTTTAATCC (11) 3.5 0.0035 P8 GC+SHH+1d culture GAACTGTCTC (4) 1.2 0.0012 P8 GC+SHH+1d culture GCTGCCCTGG (12) 1.2 0.0012 3T3 fibroblasts TCAGGCTGCC (2) 361 0.361 3T3 fibroblasts GCTGCCCTGG (12) 3.5 0.0035 3T3 fibroblasts TGACCGGCTG 3.5 0.0035 E15 cortex TCAGGCTGCC (2) 84.1 0.0841 E15 cortex TGACCGGCTG 9.9 0.0099 E15 cortex GCTGCCCTGG (12) 4.9 0.0049 P1 cortex TCAGGCTGCC (2) 54.5 0.0545 P1 cortex CCCTGAGCCA (5) 4.5 0.0045 P1 cortex GCTTTAATCC (11) 4.5 0.0045 P1 cortex TGGGGAAGTA (2) 4.5 0.0045 Hypothalamus TCAGGCTGCC (2) 490.8 0.4908 Hypothalamus TGACCGGCTG 9.1 0.0091 Hypothalamus GCTGCCCTGG (12) 1.8 0.0018 Hypothalamus TGGGAAGTAA 1.8 0.0018 E12.5 retina TCAGGCTGCC (2) 82.6 0.0826 E12.5 retina GACTTCTATT 3.8 0.0038 E12.5 retina TGACCGGCTG 1.9 0.0019 E14.5 retina TCAGGCTGCC (2) 85.6 0.0856 E14.5 retina CTGAGAGAAG (3) 1.8 0.0018 E14.5 retina GACTTCTATT 1.8 0.0018 E14.5 retina GATGTTAGAT (3) 1.8 0.0018 E14.5 retina GCTGCCCTGG (12) 1.8 0.0018 E14.5 retina GCTTTAATCC (11) 1.8 0.0018 E14.5 retina TCTCTGTTTC 1.8 0.0018 E16.5 retina TCAGGCTGCC (2) 103.2 0.1032 E16.5 retina TGACCGGCTG 5.4 0.0054 E16.5 retina GATGTTAGAT (3) 1.8 0.0018 E16.5 retina GCTGCCCTGG (12) 1.8 0.0018 E18.5 retina TCAGGCTGCC (2) 69.1 0.0691 E18.5 retina TGACCGGCTG 9.1 0.0091 E18.5 retina GACTTCTATT 3.6 0.0036 E18.5 retina GAACTGTCTC (4) 1.8 0.0018 P0.5 retina TCAGGCTGCC (2) 66.7 0.0667 P0.5 retina TGACCGGCTG 5.9 0.0059 P0.5 retina CCCTGAGCCA (5) 2 0.002 P0.5 retina CTGAGAGAAG (3) 2 0.002 P0.5 retina GACTTCTATT 2 0.002 P0.5 retina GCTTTAATCC (11) 2 0.002 P2.5 retina TCAGGCTGCC (2) 80.9 0.0809 P2.5 retina GACTTCTATT 7 0.007 P2.5 retina GCTGCCCTGG (12) 3.5 0.0035 P2.5 retina GCTTTAATCC (11) 3.5 0.0035 P2.5 retina CTGAGAGAAG (3) 1.8 0.0018 P2.5 retina TGACCGGCTG 1.8 0.0018 P4.5 retina TCAGGCTGCC (2) 95.1 0.0951 P4.5 retina TGACCGGCTG 7.9 0.0079 P4.5 retina GAACTGTCTC (4) 4 0.004 P4.5 retina GCTTTAATCC (11) 4 0.004 P4.5 retina GATGTTAGAT (3) 2 0.002 P6.5 retina TCAGGCTGCC (2) 133.4 0.1334 P6.5 retina TGACCGGCTG 8.3 0.0083 P6.5 retina GAACTGTCTC (4) 1.7 0.0017 P6.5 retina GCTTTAATCC (11) 1.7 0.0017 P6.5 retina TCTCTGTTTC 1.7 0.0017 P6.5 retina TGGGGAAGTA (2) 1.7 0.0017 P10.5 crx- retina TCAGGCTGCC (2) 157.9 0.1579 P10.5 crx- retina TGACCGGCTG 3.7 0.0037 P10.5 crx- retina TGGGAAGTAA 1.9 0.0019 P10.5 crx+ retina TCAGGCTGCC (2) 196.1 0.1961 P10.5 crx+ retina TGACCGGCTG 32.7 0.0327 P10.5 crx+ retina GACTTCTATT 3.8 0.0038 P10.5 crx+ retina GCTTTAATCC (11) 3.8 0.0038 P10.5 crx+ retina CCCTGAAGCC (2) 1.9 0.0019 P10.5 crx+ retina TGGGAAGTAA 1.9 0.0019 Adult retinal TCAGGCTGCC (2) 75.9 0.0759 Adult retinal TGACCGGCTG 9.3 0.0093 Adult retinal GACTTCTATT 3.7 0.0037 Adult retinal GCTGCCCTGG (12) 3.7 0.0037 Adult retinal GCTTTAATCC (11) 1.9 0.0019 Adult retinal TGGGAAGTAA 1.9 0.0019 ONL TCAGGCTGCC (2) 78.5 0.0785 ONL TGACCGGCTG 7.7 0.0077 ONL TGGGGAAGTA (2) 3.8 0.0038 ONL AGCCATATGA (2) 1.9 0.0019 ONL GACTTCTATT 1.9 0.0019 ONL GCTTTAATCC (11) 1.9 0.0019