Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.294315	Capn10	calpain 10	1		23830
Gene Ontology	calpain activity | cysteine-type endopeptidase activity | cysteine-type peptidase activity | hydrolase activity | intracellular | proteolysis and peptidolysis
Human Homolog	CAPN10[calpain 10]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGAGAAGTT (4) 6.5 0.0065 P8 Cb GC AATAATTTAT (6) 4.9 0.0049 P8 Cb GC CTGGGATAGC (2) 1.6 0.0016 P8 Cb GC GGAGGGAAAG 1.6 0.0016 Cb medulloblastoma AATAATTTAA (8) 4.6 0.0046 Cb medulloblastoma AGGAGAAGTT (4) 4.6 0.0046 Cb medulloblastoma AATAATTTAT (6) 2.3 0.0023 Cb medulloblastoma GCTGGCAACC (2) 2.3 0.0023 Cb medulloblastoma TTTATTTATA (6) 2.3 0.0023 P8 GC+1d culture AGGAGAAGTT (4) 8 0.008 P8 GC+1d culture AATAATTTAT (6) 2.3 0.0023 P8 GC+1d culture AACCTTAAAA (2) 1.1 0.0011 P8 GC+1d culture GCTGGCAACC (2) 1.1 0.0011 P8 GC+1d culture TTTATTTATA (6) 1.1 0.0011 P8 GC+SHH+1d culture CTTCATCATC (3) 2.3 0.0023 P8 GC+SHH+1d culture TTTATTTATA (6) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GCCAGAGTGC (4) 3.5 0.0035 E15 cortex GCCAGAGTGC (4) 9.9 0.0099 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex AATAATTTAA (8) 4.5 0.0045 P1 cortex AGGAGAAGTT (4) 4.5 0.0045 P1 cortex CTGGGATAGC (2) 4.5 0.0045 Hypothalamus AGGAGAAGTT (4) 3.6 0.0036 Hypothalamus AATAATTTAT (6) 1.8 0.0018 E12.5 retina AATAATTTAA (8) 1.9 0.0019 E12.5 retina CTGGGATAGC (2) 1.9 0.0019 E14.5 retina AATAATTTAT (6) 5.5 0.0055 E14.5 retina AGGAGAAGTT (4) 3.6 0.0036 E14.5 retina CTTCATCATC (3) 3.6 0.0036 E14.5 retina GGAGGGAAAG 3.6 0.0036 E14.5 retina GCTGGCAACC (2) 1.8 0.0018 E16.5 retina CTTCATCATC (3) 5.4 0.0054 E16.5 retina AGGAGAAGTT (4) 3.6 0.0036 E16.5 retina AACCTTAAAA (2) 1.8 0.0018 E16.5 retina AATAATTTAA (8) 1.8 0.0018 E16.5 retina GCCAGAGTGC (4) 1.8 0.0018 E18.5 retina AATAATTTAT (6) 5.5 0.0055 E18.5 retina AGGAGAAGTT (4) 5.5 0.0055 E18.5 retina AATAATTTAA (8) 3.6 0.0036 E18.5 retina TTTATTTATA (6) 3.6 0.0036 P0.5 retina AGGAGAAGTT (4) 7.9 0.0079 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AATAATTTAT (6) 2 0.002 P0.5 retina CTTCATCATC (3) 2 0.002 P2.5 retina AATAATTTAA (8) 5.3 0.0053 P2.5 retina TTTATTTATA (6) 3.5 0.0035 P2.5 retina AATAATTTAT (6) 1.8 0.0018 P2.5 retina AGGAGAAGTT (4) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina AGGAGAAGTT (4) 4 0.004 P4.5 retina AATAATTTAA (8) 2 0.002 P4.5 retina AATAATTTAT (6) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina AATAATTTAA (8) 5 0.005 P6.5 retina CTTCATCATC (3) 5 0.005 P6.5 retina GGAGGGAAAG 5 0.005 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina AATAATTTAT (6) 1.7 0.0017 P6.5 retina GCCAGAGTGC (4) 1.7 0.0017 P6.5 retina TTTATTTATA (6) 1.7 0.0017 P10.5 crx- retina AGGAGAAGTT (4) 9.3 0.0093 P10.5 crx- retina AATAATTTAT (6) 3.7 0.0037 P10.5 crx- retina AATAATTTAA (8) 1.9 0.0019 P10.5 crx+ retina AGGAGAAGTT (4) 5.8 0.0058 P10.5 crx+ retina GGAGGGAAAG 5.8 0.0058 P10.5 crx+ retina AATAATTTAA (8) 3.8 0.0038 Adult retinal GGAGGGAAAG 5.6 0.0056 Adult retinal AGGAGAAGTT (4) 1.9 0.0019 Adult retinal GCCAGAGTGC (4) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL CTTCATCATC (3) 1.9 0.0019