Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.294315	Capn10	calpain 10	1		23830
Gene Ontology	calpain activity | cysteine-type endopeptidase activity | cysteine-type peptidase activity | hydrolase activity | intracellular | proteolysis and peptidolysis
Human Homolog	CAPN10[calpain 10]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATAATTTAT (3) AGGAGAAGTT CTGGGATAGC GGAGGGAAAG 14.6 0.0146 Cb medulloblastoma AATAATTTAA (2) AATAATTTAT (3) AGGAGAAGTT GCTGGCAACC TTTATTTATA (3) 16.1 0.0161 P8 GC+1d culture AACCTTAAAA AATAATTTAT (3) AGGAGAAGTT GCTGGCAACC TTTATTTATA (3) 13.6 0.0136 P8 GC+SHH+1d culture CTTCATCATC (2) TTTATTTATA (3) 3.5 0.0035 3T3 fibroblasts GCCAGAGTGC (3) GTCATAGCTG (2) 14 0.014 E15 cortex GCCAGAGTGC (3) GTCATAGCTG (2) 14.8 0.0148 P1 cortex AATAATTTAA (2) AGGAGAAGTT CTGGGATAGC 13.5 0.0135 Hypothalamus AATAATTTAT (3) AGGAGAAGTT 5.4 0.0054 E12.5 retina AATAATTTAA (2) CTGGGATAGC 3.8 0.0038 E14.5 retina AATAATTTAT (3) AGGAGAAGTT CTTCATCATC (2) GCTGGCAACC GGAGGGAAAG 18.1 0.0181 E16.5 retina AACCTTAAAA AATAATTTAA (2) AGGAGAAGTT CTTCATCATC (2) GCCAGAGTGC (3) 14.4 0.0144 E18.5 retina AATAATTTAA (2) AATAATTTAT (3) AGGAGAAGTT TTTATTTATA (3) 18.2 0.0182 P0.5 retina AATAATTTAT (3) AGGAGAAGTT CTTCATCATC (2) GTCATAGCTG (2) 15.8 0.0158 P2.5 retina AATAATTTAA (2) AATAATTTAT (3) AGGAGAAGTT GTCATAGCTG (2) TTTATTTATA (3) 14.2 0.0142 P4.5 retina AATAATTTAA (2) AATAATTTAT (3) AGGAGAAGTT GTCATAGCTG (2) 10 0.01 P6.5 retina AATAATTTAA (2) AATAATTTAT (3) CTTCATCATC (2) GCCAGAGTGC (3) GGAGGGAAAG GTCATAGCTG (2) TTTATTTATA (3) 23.4 0.0234 P10.5 crx- retina AATAATTTAA (2) AATAATTTAT (3) AGGAGAAGTT 14.9 0.0149 P10.5 crx+ retina AATAATTTAA (2) AGGAGAAGTT GGAGGGAAAG 15.4 0.0154 Adult retinal AGGAGAAGTT GCCAGAGTGC (3) GGAGGGAAAG GTCATAGCTG (2) 11.3 0.0113 ONL CTTCATCATC (2) GTCATAGCTG (2) 7.6 0.0076