Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.295875
1500006O09Rik
RIKEN cDNA 1500006O09 gene
14
66231
Human Homolog
NIF3L1BP1[Ngg1 interacting factor 3 like 1 binding protein 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 74 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGAAAAAAA (
22
)
4.9
0.0049
P8 Cb GC
TGTCATTCAT
4.9
0.0049
P8 Cb GC
TGTCGTTCAT
(
3
)
3.3
0.0033
P8 Cb GC
CTGAGCACTC
(
2
)
1.6
0.0016
P8 Cb GC
GAGGAGGAGG (
35
)
1.6
0.0016
Cb medulloblastoma
GTGAAAAAAA (
22
)
43.9
0.0439
Cb medulloblastoma
TGTCATTCAT
2.3
0.0023
P8 GC+1d culture
TGTCATTCAT
11.4
0.0114
P8 GC+1d culture
GTGAAAAAAA (
22
)
6.8
0.0068
P8 GC+1d culture
GGCTTCCTGG
(
7
)
1.1
0.0011
P8 GC+SHH+1d culture
TGTCATTCAT
17.6
0.0176
P8 GC+SHH+1d culture
GTGAAAAAAA (
22
)
10.5
0.0105
P8 GC+SHH+1d culture
GGCTTCCTGG
(
7
)
2.3
0.0023
P8 GC+SHH+1d culture
TGTCGTTCAT
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGAGCACTC
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GAGGAGGAGG (
35
)
1.2
0.0012
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
GAGGAGGAGG (
35
)
3.5
0.0035
E15 cortex
GAGGAGGAGG (
35
)
4.9
0.0049
E15 cortex
GGCTTCCTGG
(
7
)
4.9
0.0049
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
GAGGAGGAGG (
35
)
4.5
0.0045
P1 cortex
TGTCGTTCAT
(
3
)
4.5
0.0045
Hypothalamus
GTGAAAAAAA (
22
)
18.1
0.0181
Hypothalamus
TGTCGTTCAT
(
3
)
10.9
0.0109
Hypothalamus
GAGGAGGAGG (
35
)
7.2
0.0072
E12.5 retina
TGTCGTTCAT
(
3
)
13.1
0.0131
E12.5 retina
GTGAAAAAAA (
22
)
11.3
0.0113
E12.5 retina
GAGGAGGAGG (
35
)
1.9
0.0019
E14.5 retina
GTGAAAAAAA (
22
)
12.8
0.0128
E14.5 retina
TGTCGTTCAT
(
3
)
12.8
0.0128
E14.5 retina
GGCTTCCTGG
(
7
)
3.6
0.0036
E16.5 retina
TGTCGTTCAT
(
3
)
9.1
0.0091
E16.5 retina
GTGAAAAAAA (
22
)
5.4
0.0054
E16.5 retina
GGCTTCCTGG
(
7
)
3.6
0.0036
E16.5 retina
CTGAGCACTC
(
2
)
1.8
0.0018
E18.5 retina
GTGAAAAAAA (
22
)
20
0.02
E18.5 retina
TGTCGTTCAT
(
3
)
10.9
0.0109
E18.5 retina
GGCTTCCTGG
(
7
)
3.6
0.0036
E18.5 retina
AAACTTTCAA (
12
)
1.8
0.0018
P0.5 retina
TGTCGTTCAT
(
3
)
11.8
0.0118
P0.5 retina
GTGAAAAAAA (
22
)
7.9
0.0079
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
CTGAGCACTC
(
2
)
2
0.002
P0.5 retina
GGCTTCCTGG
(
7
)
2
0.002
P2.5 retina
TGTCGTTCAT
(
3
)
15.8
0.0158
P2.5 retina
GTGAAAAAAA (
22
)
10.6
0.0106
P2.5 retina
CTGAGCACTC
(
2
)
3.5
0.0035
P2.5 retina
GAGGAGGAGG (
35
)
1.8
0.0018
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
GTGAAAAAAA (
22
)
23.8
0.0238
P4.5 retina
TGTCGTTCAT
(
3
)
15.9
0.0159
P4.5 retina
GAGGAGGAGG (
35
)
2
0.002
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
TGTCGTTCAT
(
3
)
15
0.015
P6.5 retina
GTGAAAAAAA (
22
)
5
0.005
P6.5 retina
AAACTTTCAA (
12
)
3.3
0.0033
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
GGCTTCCTGG
(
7
)
1.7
0.0017
P10.5 crx- retina
TGTCATTCAT
13
0.013
P10.5 crx- retina
GTGAAAAAAA (
22
)
3.7
0.0037
P10.5 crx- retina
GAGGAGGAGG (
35
)
1.9
0.0019
P10.5 crx- retina
GGCTTCCTGG
(
7
)
1.9
0.0019
P10.5 crx+ retina
GTGAAAAAAA (
22
)
5.8
0.0058
P10.5 crx+ retina
TGTCATTCAT
1.9
0.0019
Adult retinal
TGTCGTTCAT
(
3
)
9.3
0.0093
Adult retinal
GAGGAGGAGG (
35
)
3.7
0.0037
Adult retinal
GTGAAAAAAA (
22
)
3.7
0.0037
Adult retinal
GGCTTCCTGG
(
7
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
GTGAAAAAAA (
22
)
5.7
0.0057
ONL
TGTCGTTCAT
(
3
)
3.8
0.0038
ONL
GAGGAGGAGG (
35
)
1.9
0.0019
