Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.295875	1500006O09Rik	RIKEN cDNA 1500006O09 gene	14		66231
Human Homolog	NIF3L1BP1[Ngg1 interacting factor 3 like 1 binding protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGAGCACTC GAGGAGGAGG (2) GTGAAAAAAA (2) TGTCATTCAT TGTCGTTCAT 16.3 0.0163 Cb medulloblastoma GTGAAAAAAA (2) TGTCATTCAT 46.2 0.0462 P8 GC+1d culture GGCTTCCTGG (2) GTGAAAAAAA (2) TGTCATTCAT 19.3 0.0193 P8 GC+SHH+1d culture CTGAGCACTC GAGGAGGAGG (2) GGCTTCCTGG (2) GTGAAAAAAA (2) TGTCATTCAT TGTCGTTCAT 35.1 0.0351 3T3 fibroblasts GAGGAGGAGG (2) GTCATAGCTG (2) 14 0.014 E15 cortex GAGGAGGAGG (2) GGCTTCCTGG (2) GTCATAGCTG (2) 14.7 0.0147 P1 cortex GAGGAGGAGG (2) TGTCGTTCAT 9 0.009 Hypothalamus GAGGAGGAGG (2) GTGAAAAAAA (2) TGTCGTTCAT 36.2 0.0362 E12.5 retina GAGGAGGAGG (2) GTGAAAAAAA (2) TGTCGTTCAT 26.3 0.0263 E14.5 retina GGCTTCCTGG (2) GTGAAAAAAA (2) TGTCGTTCAT 29.2 0.0292 E16.5 retina CTGAGCACTC GGCTTCCTGG (2) GTGAAAAAAA (2) TGTCGTTCAT 19.9 0.0199 E18.5 retina AAACTTTCAA GGCTTCCTGG (2) GTGAAAAAAA (2) TGTCGTTCAT 36.3 0.0363 P0.5 retina CTGAGCACTC GGCTTCCTGG (2) GTCATAGCTG (2) GTGAAAAAAA (2) TGTCGTTCAT 27.6 0.0276 P2.5 retina CTGAGCACTC GAGGAGGAGG (2) GTCATAGCTG (2) GTGAAAAAAA (2) TGTCGTTCAT 33.5 0.0335 P4.5 retina GAGGAGGAGG (2) GTCATAGCTG (2) GTGAAAAAAA (2) TGTCGTTCAT 43.7 0.0437 P6.5 retina AAACTTTCAA GGCTTCCTGG (2) GTCATAGCTG (2) GTGAAAAAAA (2) TGTCGTTCAT 28.3 0.0283 P10.5 crx- retina GAGGAGGAGG (2) GGCTTCCTGG (2) GTGAAAAAAA (2) TGTCATTCAT 20.5 0.0205 P10.5 crx+ retina GTGAAAAAAA (2) TGTCATTCAT 7.7 0.0077 Adult retinal GAGGAGGAGG (2) GGCTTCCTGG (2) GTCATAGCTG (2) GTGAAAAAAA (2) TGTCGTTCAT 20.5 0.0205 ONL GAGGAGGAGG (2) GTCATAGCTG (2) GTGAAAAAAA (2) TGTCGTTCAT 17.1 0.0171