Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29652	Pomt2	protein-O-mannosyltransferase 2	12		217734
Gene Ontology	endoplasmic reticulum | integral to membrane | mannosyltransferase activity | membrane | O-linked glycosylation | serine-type endopeptidase inhibitor activity | transferase activity | transferase activity, transferring glycosyl groups
Human Homolog	POMT2[protein-O-mannosyltransferase 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 108 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC AATAAACTTT (2) 6.5 0.0065 P8 Cb GC GTGCTGGAGA (13) 3.3 0.0033 P8 Cb GC GAGTCCAGGC (3) 1.6 0.0016 P8 Cb GC GGCTAAAATA (3) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma AATAAACTTT (2) 9.2 0.0092 Cb medulloblastoma GGCTAAAATA (3) 4.6 0.0046 Cb medulloblastoma GCAACTCTGA (4) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture GAGTCCAGGC (3) 3.4 0.0034 P8 GC+1d culture AATAAACTTT (2) 2.3 0.0023 P8 GC+1d culture AAATTTCAGT (2) 1.1 0.0011 P8 GC+1d culture GATGGCACCA (4) 1.1 0.0011 P8 GC+1d culture GTGCTGGAGA (13) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GGCTAAAATA (3) 5.9 0.0059 P8 GC+SHH+1d culture AATAAACTTT (2) 4.7 0.0047 P8 GC+SHH+1d culture GAGTCCAGGC (3) 2.3 0.0023 P8 GC+SHH+1d culture AAATTTCAGT (2) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GGCTAAAATA (3) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex AATAAACTTT (2) 4.9 0.0049 E15 cortex GATGGCACCA (4) 4.9 0.0049 E15 cortex GTGCTGGAGA (13) 4.9 0.0049 E15 cortex GTTACAGGGA (7) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex AATAAACTTT (2) 9.1 0.0091 P1 cortex GGCTAAAATA (3) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GGCTAAAATA (3) 7.2 0.0072 Hypothalamus GAGTCCAGGC (3) 3.6 0.0036 Hypothalamus GCAACTCTGA (4) 3.6 0.0036 Hypothalamus AAATTTCAGT (2) 1.8 0.0018 Hypothalamus AATAAACTTT (2) 1.8 0.0018 Hypothalamus ACCAGCTCTC (4) 1.8 0.0018 Hypothalamus GAGTACCTGG (7) 1.8 0.0018 Hypothalamus GATGGCACCA (4) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina AATAAACTTT (2) 5.6 0.0056 E12.5 retina GGCTAAAATA (3) 3.8 0.0038 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina AATAAACTTT (2) 7.3 0.0073 E14.5 retina GGCTAAAATA (3) 5.5 0.0055 E14.5 retina AAATTTCAGT (2) 3.6 0.0036 E14.5 retina CAACAGGACA (2) 1.8 0.0018 E14.5 retina GAGTACCTGG (7) 1.8 0.0018 E14.5 retina GAGTCCAGGC (3) 1.8 0.0018 E14.5 retina GTGCTGGAGA (13) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina AAATTTCAGT (2) 3.6 0.0036 E16.5 retina AATAAACTTT (2) 3.6 0.0036 E16.5 retina GGCTAAAATA (3) 3.6 0.0036 E16.5 retina ACCAGCTCTC (4) 1.8 0.0018 E16.5 retina CAACAGGACA (2) 1.8 0.0018 E16.5 retina GAGTCCAGGC (3) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina GGCTAAAATA (3) 7.3 0.0073 E18.5 retina AAATTTCAGT (2) 3.6 0.0036 E18.5 retina GAGTCCAGGC (3) 3.6 0.0036 E18.5 retina AATAAACTTT (2) 1.8 0.0018 E18.5 retina ACCAGCTCTC (4) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina AATAAACTTT (2) 5.9 0.0059 P0.5 retina GGCTAAAATA (3) 3.9 0.0039 P0.5 retina GCAACTCTGA (4) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GGCTAAAATA (3) 7 0.007 P2.5 retina AATAAACTTT (2) 5.3 0.0053 P2.5 retina AAATTTCAGT (2) 1.8 0.0018 P2.5 retina CAACAGGACA (2) 1.8 0.0018 P2.5 retina GTGCTGGAGA (13) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina AATAAACTTT (2) 19.8 0.0198 P4.5 retina GGCTAAAATA (3) 7.9 0.0079 P4.5 retina AAATTTCAGT (2) 4 0.004 P4.5 retina GAGTACCTGG (7) 2 0.002 P4.5 retina GTGCTGGAGA (13) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina GGCTAAAATA (3) 8.3 0.0083 P6.5 retina AATAAACTTT (2) 1.7 0.0017 P6.5 retina GCAACTCTGA (4) 1.7 0.0017 P6.5 retina GTTACAGGGA (7) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GCAACTCTGA (4) 7.4 0.0074 P10.5 crx- retina AAATTTCAGT (2) 3.7 0.0037 P10.5 crx- retina AATAAACTTT (2) 3.7 0.0037 P10.5 crx- retina ACCAGCTCTC (4) 1.9 0.0019 P10.5 crx- retina GGCTAAAATA (3) 1.9 0.0019 P10.5 crx- retina GTGCTGGAGA (13) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina AATAAACTTT (2) 5.8 0.0058 P10.5 crx+ retina GCACTCTGAC 1.9 0.0019 P10.5 crx+ retina GGCTAAAATA (3) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal AATAAACTTT (2) 3.7 0.0037 Adult retinal GCACTCTGAC 3.7 0.0037 Adult retinal GCAACTCTGA (4) 1.9 0.0019 Adult retinal GGCTAAAATA (3) 1.9 0.0019 Adult retinal GTGCTGGAGA (13) 1.9 0.0019 Adult retinal GTTACAGGGA (7) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL AATAAACTTT (2) 9.6 0.0096 ONL GTGCTGGAGA (13) 5.7 0.0057 ONL GTTACAGGGA (7) 5.7 0.0057 ONL AAATTTCAGT (2) 3.8 0.0038 ONL GCACTCTGAC 1.9 0.0019