Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.298003
Ppapdc1
phosphatidic acid phosphatase type 2 domain containing 1
8
71910
Human Homolog
HTPAP[HTPAP protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 25 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACCCCATTTA
(
3
)
1.6
0.0016
P8 Cb GC
CACAATCTCC
(
7
)
1.6
0.0016
Cb medulloblastoma
ATAACAGACG (
2
)
2.3
0.0023
P8 GC+1d culture
ATAACAGACG (
2
)
1.1
0.0011
P8 GC+1d culture
CACAATCTCC
(
7
)
1.1
0.0011
P8 GC+SHH+1d culture
CACAATCTCC
(
7
)
1.2
0.0012
P8 GC+SHH+1d culture
TGTTGCTGGG
(
6
)
1.2
0.0012
3T3 fibroblasts
CACAATCTCC
(
7
)
10.5
0.0105
E12.5 retina
AATGTAGGCA (
3
)
1.9
0.0019
E12.5 retina
ACCCCATTTA
(
3
)
1.9
0.0019
E14.5 retina
AATGTAGGCA (
3
)
1.8
0.0018
E14.5 retina
TGGGTTGCTG (
5
)
1.8
0.0018
E16.5 retina
TGTTGCTGGG
(
6
)
1.8
0.0018
E18.5 retina
ACCCCATTTA
(
3
)
1.8
0.0018
P0.5 retina
CACAATCTCC
(
7
)
2
0.002
P2.5 retina
ACCCCATTTA
(
3
)
1.8
0.0018
P4.5 retina
CACAATCTCC
(
7
)
4
0.004
P4.5 retina
AATGTAGGCA (
3
)
2
0.002
P6.5 retina
CACAATCTCC
(
7
)
1.7
0.0017
P10.5 crx- retina
ACCCCATTTA
(
3
)
7.4
0.0074
P10.5 crx- retina
AATGTAGGCA (
3
)
3.7
0.0037
P10.5 crx- retina
CACAATCTCC
(
7
)
3.7
0.0037
P10.5 crx- retina
ATAACAGACG (
2
)
1.9
0.0019
P10.5 crx- retina
TGGGTTGCTG (
5
)
1.9
0.0019
ONL
TGGGTTGCTG (
5
)
1.9
0.0019
