Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30144	Tpbpb	trophoblast specific protein beta	13		116913
Gene Ontology	extracellular space
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 99 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAATAAAACT (2) 6.5 0.0065 P8 Cb GC TCTCTAGCTG (8) 6.5 0.0065 P8 Cb GC ATGTCTTCAA 3.3 0.0033 P8 Cb GC CTGGACACTG (7) 1.6 0.0016 P8 Cb GC GCACAAACTA (3) 1.6 0.0016 Cb medulloblastoma TGCTGTGTTG (2) 6.9 0.0069 Cb medulloblastoma GCACAAACTA (3) 2.3 0.0023 Cb medulloblastoma TGCCTGTGTG (5) 2.3 0.0023 P8 GC+1d culture TGCTGTGTTG (2) 5.7 0.0057 P8 GC+1d culture CAATAAAACT (2) 3.4 0.0034 P8 GC+1d culture CTGGACACTG (7) 2.3 0.0023 P8 GC+1d culture GCACAAACTA (3) 2.3 0.0023 P8 GC+1d culture TACAAGCTGG (4) 2.3 0.0023 P8 GC+1d culture TCTCTAGCTG (8) 2.3 0.0023 P8 GC+1d culture ATGTCTTCAA 1.1 0.0011 P8 GC+1d culture CCAATAAAAA (3) 1.1 0.0011 P8 GC+SHH+1d culture CTGGACACTG (7) 4.7 0.0047 P8 GC+SHH+1d culture TCTCTAGCTG (8) 4.7 0.0047 P8 GC+SHH+1d culture TGCTGTGTTG (2) 2.3 0.0023 P8 GC+SHH+1d culture ATGTCTTCAA 1.2 0.0012 P8 GC+SHH+1d culture GCACAAACTA (3) 1.2 0.0012 P8 GC+SHH+1d culture TACAAGCTGG (4) 1.2 0.0012 3T3 fibroblasts TGCTGTGTTG (2) 17.5 0.0175 3T3 fibroblasts GCACAAACTA (3) 14 0.014 3T3 fibroblasts CTGGACACTG (7) 3.5 0.0035 3T3 fibroblasts TACAAGCTGG (4) 3.5 0.0035 3T3 fibroblasts TCTCTAGCTG (8) 3.5 0.0035 E15 cortex TCTCTAGCTG (8) 9.9 0.0099 E15 cortex CAATAAAATT (3) 4.9 0.0049 E15 cortex CTGGACACTG (7) 4.9 0.0049 P1 cortex CTGGACACTG (7) 18.2 0.0182 P1 cortex GCACAAACTA (3) 9.1 0.0091 P1 cortex CAATAAAATT (3) 4.5 0.0045 P1 cortex TCTCTAGCTG (8) 4.5 0.0045 P1 cortex TGCCTGTGTG (5) 4.5 0.0045 P1 cortex TGCTGTGTTG (2) 4.5 0.0045 Hypothalamus TGCTGTGTTG (2) 10.9 0.0109 Hypothalamus CTGGACACTG (7) 7.2 0.0072 Hypothalamus CAATAAAACT (2) 1.8 0.0018 Hypothalamus CAATAAACCT (2) 1.8 0.0018 Hypothalamus GCACAAACTA (3) 1.8 0.0018 Hypothalamus TCTCTAGCTG (8) 1.8 0.0018 E12.5 retina TGCTGTGTTG (2) 13.1 0.0131 E12.5 retina CTGGACACTG (7) 3.8 0.0038 E12.5 retina TACAAGCTGG (4) 3.8 0.0038 E12.5 retina CAATAAACCT (2) 1.9 0.0019 E14.5 retina TGCTGTGTTG (2) 10.9 0.0109 E14.5 retina GCACAAACTA (3) 1.8 0.0018 E14.5 retina TCTCTAGCTG (8) 1.8 0.0018 E16.5 retina CTGGACACTG (7) 5.4 0.0054 E16.5 retina TGCTGTGTTG (2) 5.4 0.0054 E18.5 retina TGCTGTGTTG (2) 10.9 0.0109 E18.5 retina CCAATAAAAA (3) 3.6 0.0036 E18.5 retina CTGGACACTG (7) 3.6 0.0036 E18.5 retina TACAAGCTGG (4) 1.8 0.0018 E18.5 retina TCTCTAGCTG (8) 1.8 0.0018 P0.5 retina TGCTGTGTTG (2) 11.8 0.0118 P0.5 retina TCTCTAGCTG (8) 5.9 0.0059 P0.5 retina TACAAGCTGG (4) 3.9 0.0039 P0.5 retina CTGGACACTG (7) 2 0.002 P0.5 retina GCACAAACTA (3) 2 0.002 P2.5 retina TGCTGTGTTG (2) 10.6 0.0106 P2.5 retina CTGGACACTG (7) 7 0.007 P2.5 retina TCTCTAGCTG (8) 7 0.007 P2.5 retina CAATAAACCT (2) 5.3 0.0053 P2.5 retina ATGTCTTCAA 3.5 0.0035 P2.5 retina GCACAAACTA (3) 3.5 0.0035 P4.5 retina TGCTGTGTTG (2) 7.9 0.0079 P4.5 retina CAATAAAACT (2) 2 0.002 P4.5 retina CAATAAAATT (3) 2 0.002 P4.5 retina CTGGACACTG (7) 2 0.002 P4.5 retina TCTCTAGCTG (8) 2 0.002 P4.5 retina TGCCTGTGTG (5) 2 0.002 P6.5 retina CTGGACACTG (7) 10 0.01 P6.5 retina TCTCTAGCTG (8) 10 0.01 P6.5 retina TGCTGTGTTG (2) 6.7 0.0067 P6.5 retina ATGTCTTCAA 1.7 0.0017 P6.5 retina CAATAAAATT (3) 1.7 0.0017 P6.5 retina CCAATAAAAA (3) 1.7 0.0017 P6.5 retina TGCCTGTGTG (5) 1.7 0.0017 P10.5 crx- retina CTGGACACTG (7) 14.9 0.0149 P10.5 crx- retina TGCTGTGTTG (2) 7.4 0.0074 P10.5 crx- retina TACAAGCTGG (4) 1.9 0.0019 P10.5 crx- retina TCTCTAGCTG (8) 1.9 0.0019 P10.5 crx+ retina TGCTGTGTTG (2) 7.7 0.0077 P10.5 crx+ retina TCTCTAGCTG (8) 5.8 0.0058 P10.5 crx+ retina CAATAAAATT (3) 1.9 0.0019 P10.5 crx+ retina CTGGACACTG (7) 1.9 0.0019 Adult retinal CTGGACACTG (7) 18.5 0.0185 Adult retinal TCTCTAGCTG (8) 7.4 0.0074 Adult retinal TGCCTGTGTG (5) 5.6 0.0056 Adult retinal TGCTGTGTTG (2) 5.6 0.0056 Adult retinal CAATAAAACT (2) 3.7 0.0037 ONL CTGGACACTG (7) 7.7 0.0077 ONL TGCTGTGTTG (2) 5.7 0.0057 ONL TCTCTAGCTG (8) 3.8 0.0038 ONL ATGTCTTCAA 1.9 0.0019 ONL CAATAAAACT (2) 1.9 0.0019 ONL TACAAGCTGG (4) 1.9 0.0019