Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.305990	2310028O11Rik	RIKEN cDNA 2310028O11 gene	4		66378
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 102 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCTCCAAGG (14) 78.3 0.0783 P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC TTTATTCCTC (4) 11.4 0.0114 P8 Cb GC TTCCTCACTG 3.3 0.0033 P8 Cb GC GTGACAGTGG (4) 1.6 0.0016 P8 Cb GC GTTCAATCTG 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma GCCTCCAAGG (14) 120.2 0.1202 Cb medulloblastoma TTTATTCCTC (4) 9.2 0.0092 Cb medulloblastoma GTTCAATCTG 2.3 0.0023 P8 GC+1d culture GCCTCCAAGG (14) 99.3 0.0993 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture TTTATTCCTC (4) 12.6 0.0126 P8 GC+1d culture GTTCAATCTG 1.1 0.0011 P8 GC+SHH+1d culture GCCTCCAAGG (14) 146.4 0.1464 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture TTTATTCCTC (4) 8.2 0.0082 P8 GC+SHH+1d culture CTGACAGTTG (3) 2.3 0.0023 P8 GC+SHH+1d culture CTGACAGTGG (3) 1.2 0.0012 P8 GC+SHH+1d culture TTCCTCACTG 1.2 0.0012 3T3 fibroblasts GCCTCCAAGG (14) 452.1 0.4521 3T3 fibroblasts CTGACAGTGG (3) 7 0.007 3T3 fibroblasts GTGACAGTGG (4) 3.5 0.0035 3T3 fibroblasts TTTATTCCTC (4) 3.5 0.0035 E15 cortex GCCTCCAAGG (14) 133.6 0.1336 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex ACGTAGACCC (2) 4.9 0.0049 E15 cortex GTTCAATCTG 4.9 0.0049 P1 cortex GCCTCCAAGG (14) 122.7 0.1227 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex GTGACAGTGG (4) 4.5 0.0045 Hypothalamus GCCTCCAAGG (14) 74.3 0.0743 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus CTGACAGTGG (3) 3.6 0.0036 Hypothalamus CACCGGTCCC 1.8 0.0018 Hypothalamus CTGACAGTTG (3) 1.8 0.0018 Hypothalamus GCCGACACGG (4) 1.8 0.0018 Hypothalamus GTTCAATCTG 1.8 0.0018 Hypothalamus TTTATTCCTC (4) 1.8 0.0018 E12.5 retina GCCTCCAAGG (14) 236.5 0.2365 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina TTTATTCCTC (4) 9.4 0.0094 E12.5 retina GTTCAATCTG 1.9 0.0019 E12.5 retina TTTATTCCTG (3) 1.9 0.0019 E14.5 retina GCCTCCAAGG (14) 40.1 0.0401 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina TTTATTCCTC (4) 9.1 0.0091 E14.5 retina ACGTAGACCC (2) 1.8 0.0018 E16.5 retina GCCTCCAAGG (14) 83.3 0.0833 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina TTTATTCCTC (4) 10.9 0.0109 E16.5 retina GCCGACACGG (4) 5.4 0.0054 E16.5 retina ACGTAGACCC (2) 1.8 0.0018 E16.5 retina CACCGGTCCC 1.8 0.0018 E16.5 retina CTGACAGTTG (3) 1.8 0.0018 E16.5 retina TTCCTCACTG 1.8 0.0018 E18.5 retina GCCTCCAAGG (14) 105.5 0.1055 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina TTTATTCCTC (4) 5.5 0.0055 E18.5 retina CACCGGTCCC 1.8 0.0018 E18.5 retina GCCGACACGG (4) 1.8 0.0018 P0.5 retina GCCTCCAAGG (14) 239.4 0.2394 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina TTTATTCCTC (4) 3.9 0.0039 P0.5 retina TTCCTCACTG 2 0.002 P2.5 retina GCCTCCAAGG (14) 176 0.176 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina TTTATTCCTC (4) 5.3 0.0053 P2.5 retina GTTCAATCTG 3.5 0.0035 P4.5 retina GCCTCCAAGG (14) 91.1 0.0911 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina TTTATTCCTC (4) 5.9 0.0059 P4.5 retina CTGACAGTTG (3) 4 0.004 P4.5 retina ACAAGCAAAA (3) 2 0.002 P6.5 retina GCCTCCAAGG (14) 153.4 0.1534 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina TTTATTCCTC (4) 10 0.01 P6.5 retina ACAAGCAAAA (3) 1.7 0.0017 P6.5 retina CACCGGTCCC 1.7 0.0017 P6.5 retina CTGACAGTGG (3) 1.7 0.0017 P6.5 retina GTTCAATCTG 1.7 0.0017 P6.5 retina TTTATTCCTG (3) 1.7 0.0017 P10.5 crx- retina GCCTCCAAGG (14) 341.8 0.3418 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina TTTATTCCTC (4) 9.3 0.0093 P10.5 crx- retina ACAAGCAAAA (3) 1.9 0.0019 P10.5 crx- retina ACGTAGACCC (2) 1.9 0.0019 P10.5 crx- retina CACCGGTCCC 1.9 0.0019 P10.5 crx- retina CTGACAGTTG (3) 1.9 0.0019 P10.5 crx- retina GCCGACACGG (4) 1.9 0.0019 P10.5 crx- retina GTTCAATCTG 1.9 0.0019 P10.5 crx+ retina GCCTCCAAGG (14) 265.3 0.2653 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina TTTATTCCTC (4) 3.8 0.0038 Adult retinal GCCTCCAAGG (14) 327.7 0.3277 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal TTTATTCCTC (4) 5.6 0.0056 Adult retinal TTTATTCCTG (3) 3.7 0.0037 Adult retinal CTAATATTTG (15) 1.9 0.0019 ONL GCCTCCAAGG (14) 352.4 0.3524 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL TTTATTCCTC (4) 3.8 0.0038