Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.307728	Btbd4	BTB (POZ) domain containing 4	2		72147
Gene Ontology	nucleic acid binding | nucleus | protein binding | regulation of transcription, DNA-dependent | zinc ion binding
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACTTTTAAA (7) 11.4 0.0114 P8 Cb GC GCAGCTCACA (24) 8.2 0.0082 P8 Cb GC AGTAAGAACA (3) 3.3 0.0033 P8 Cb GC AAGGAGGAAG 1.6 0.0016 P8 Cb GC TGCACTAACA (2) 1.6 0.0016 Cb medulloblastoma AACTTTTAAA (7) 23.1 0.0231 Cb medulloblastoma GCAGCTCACA (24) 6.9 0.0069 Cb medulloblastoma AAGGAGGAAG 2.3 0.0023 P8 GC+1d culture AACTTTTAAA (7) 14.8 0.0148 P8 GC+1d culture GCAGCTCACA (24) 10.3 0.0103 P8 GC+1d culture TGCACTAACA (2) 4.6 0.0046 P8 GC+1d culture CTTTCAATCT 2.3 0.0023 P8 GC+SHH+1d culture AACTTTTAAA (7) 17.6 0.0176 P8 GC+SHH+1d culture GCAGCTCACA (24) 10.5 0.0105 P8 GC+SHH+1d culture AGTAAGAACA (3) 1.2 0.0012 3T3 fibroblasts GCAGCTCACA (24) 14 0.014 3T3 fibroblasts GGTGCTGTGA (4) 3.5 0.0035 E15 cortex GCAGCTCACA (24) 24.7 0.0247 E15 cortex AACTTTTAAA (7) 4.9 0.0049 P1 cortex AACTTTTAAA (7) 9.1 0.0091 P1 cortex GCAGCTCACA (24) 4.5 0.0045 P1 cortex GGTGCTGTGA (4) 4.5 0.0045 Hypothalamus AACTTTTAAA (7) 16.3 0.0163 Hypothalamus GCAGCTCACA (24) 5.4 0.0054 Hypothalamus AAGGAGGAAG 1.8 0.0018 Hypothalamus GCAAACACTT 1.8 0.0018 E12.5 retina AACTTTTAAA (7) 20.7 0.0207 E12.5 retina GCAGCTCACA (24) 9.4 0.0094 E12.5 retina GCAAACACTT 1.9 0.0019 E12.5 retina GGTGCTGTGA (4) 1.9 0.0019 E14.5 retina GCAGCTCACA (24) 40.1 0.0401 E14.5 retina AACTTTTAAA (7) 27.3 0.0273 E16.5 retina GCAGCTCACA (24) 23.5 0.0235 E16.5 retina AACTTTTAAA (7) 14.5 0.0145 E16.5 retina GCAAACACTT 1.8 0.0018 E18.5 retina AACTTTTAAA (7) 27.3 0.0273 E18.5 retina GCAGCTCACA (24) 14.6 0.0146 P0.5 retina GCAGCTCACA (24) 15.7 0.0157 P0.5 retina AACTTTTAAA (7) 11.8 0.0118 P0.5 retina GGTGCTGTGA (4) 3.9 0.0039 P0.5 retina TGCACTAACA (2) 2 0.002 P2.5 retina AACTTTTAAA (7) 26.4 0.0264 P2.5 retina GCAGCTCACA (24) 7 0.007 P2.5 retina GCAAACACTT 1.8 0.0018 P4.5 retina AACTTTTAAA (7) 29.7 0.0297 P4.5 retina GCAGCTCACA (24) 5.9 0.0059 P4.5 retina CTTTCAATCT 4 0.004 P4.5 retina GCAAACACTT 2 0.002 P6.5 retina AACTTTTAAA (7) 23.3 0.0233 P6.5 retina GCAGCTCACA (24) 15 0.015 P6.5 retina GCAAACACTT 1.7 0.0017 P6.5 retina GGTGCTGTGA (4) 1.7 0.0017 P10.5 crx- retina GCAGCTCACA (24) 24.2 0.0242 P10.5 crx- retina AACTTTTAAA (7) 7.4 0.0074 P10.5 crx+ retina GCAGCTCACA (24) 17.3 0.0173 P10.5 crx+ retina AACTTTTAAA (7) 11.5 0.0115 Adult retinal GCAGCTCACA (24) 18.5 0.0185 Adult retinal AACTTTTAAA (7) 3.7 0.0037 ONL AACTTTTAAA (7) 9.6 0.0096 ONL GCAGCTCACA (24) 7.7 0.0077 ONL TGCACTAACA (2) 1.9 0.0019