Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.307846	Rpl22	ribosomal protein L22	4		19934
Gene Ontology	cytosolic ribosome (sensu Eukarya) | heparin binding | intracellular | protein biosynthesis | ribosome | ribosome biogenesis | RNA binding | structural constituent of ribosome
Human Homolog	RPL22[ribosomal protein L22]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 222 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC GATGCTGCCA (3) 26.1 0.0261 P8 Cb GC GCAAAAAAAA (50) 14.7 0.0147 P8 Cb GC GGAAAAAAAA (69) 8.2 0.0082 P8 Cb GC TTTTGTATCA (2) 4.9 0.0049 P8 Cb GC TGTCAGCCAC 3.3 0.0033 P8 Cb GC CAGAGGTCAG 1.6 0.0016 P8 Cb GC GACGCTGCCA 1.6 0.0016 P8 Cb GC GCTAAAAAAA (7) 1.6 0.0016 P8 Cb GC GCTACTGTCA 1.6 0.0016 P8 Cb GC GTCCGGCGAT 1.6 0.0016 P8 Cb GC TAATAAAATG (5) 1.6 0.0016 P8 Cb GC TTCAAGTTTT (4) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma GCAAAAAAAA (50) 60.1 0.0601 Cb medulloblastoma GGAAAAAAAA (69) 41.6 0.0416 Cb medulloblastoma GCTAAAAAAA (7) 9.2 0.0092 Cb medulloblastoma GCTACTGTCA 6.9 0.0069 Cb medulloblastoma TTCAAGTTTT (4) 4.6 0.0046 Cb medulloblastoma GATGCTGCCA (3) 2.3 0.0023 Cb medulloblastoma TGGTGGTCTT (2) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture GATGCTGCCA (3) 32 0.032 P8 GC+1d culture GCAAAAAAAA (50) 12.6 0.0126 P8 GC+1d culture GGAAAAAAAA (69) 5.7 0.0057 P8 GC+1d culture TAATAAAATG (5) 3.4 0.0034 P8 GC+1d culture TTTTGTATCA (2) 2.3 0.0023 P8 GC+1d culture GACGCTGCCA 1.1 0.0011 P8 GC+1d culture GCTAAAAAAA (7) 1.1 0.0011 P8 GC+1d culture TGGTGGTCTT (2) 1.1 0.0011 P8 GC+1d culture TTCAAGTTTT (4) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture GCAAAAAAAA (50) 29.3 0.0293 P8 GC+SHH+1d culture GATGCTGCCA (3) 19.9 0.0199 P8 GC+SHH+1d culture GCGGCAGAGG 7 0.007 P8 GC+SHH+1d culture GGAAAAAAAA (69) 7 0.007 P8 GC+SHH+1d culture TAATAAAATG (5) 5.9 0.0059 P8 GC+SHH+1d culture ATTCCATCTT (3) 4.7 0.0047 P8 GC+SHH+1d culture GCTACTGTCA 4.7 0.0047 P8 GC+SHH+1d culture GCTAAAAAAA (7) 2.3 0.0023 P8 GC+SHH+1d culture TGTCAGCCAC 2.3 0.0023 P8 GC+SHH+1d culture GATGCTCCCA (2) 1.2 0.0012 P8 GC+SHH+1d culture GCGCCTGTGA (6) 1.2 0.0012 P8 GC+SHH+1d culture TGCTGGCTCT (4) 1.2 0.0012 P8 GC+SHH+1d culture TTCAAGTTTT (4) 1.2 0.0012 P8 GC+SHH+1d culture TTTTGTATCA (2) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GATGCTGCCA (3) 17.5 0.0175 3T3 fibroblasts GCAAAAAAAA (50) 3.5 0.0035 3T3 fibroblasts GCGCCTGTGA (6) 3.5 0.0035 3T3 fibroblasts GCGGCAGAGG 3.5 0.0035 3T3 fibroblasts GCTAAAAAAA (7) 3.5 0.0035 3T3 fibroblasts TTCAAGTTTT (4) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex GATGCTGCCA (3) 49.5 0.0495 E15 cortex GCAAAAAAAA (50) 9.9 0.0099 E15 cortex GGAAAAAAAA (69) 9.9 0.0099 E15 cortex ATTCCATCTT (3) 4.9 0.0049 E15 cortex GCTAAAAAAA (7) 4.9 0.0049 E15 cortex GCTACTGTCA 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex TAATAAAATG (5) 9.1 0.0091 P1 cortex GATGCTCCCA (2) 4.5 0.0045 P1 cortex GATGCTGCCA (3) 4.5 0.0045 P1 cortex GCAAAAAAAA (50) 4.5 0.0045 P1 cortex GCTACTGTCA 4.5 0.0045 P1 cortex GGAAAAAAAA (69) 4.5 0.0045 P1 cortex TTCAAGTTTT (4) 4.5 0.0045 P1 cortex TTTTGTATCA (2) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus GCAAAAAAAA (50) 19.9 0.0199 Hypothalamus GGAAAAAAAA (69) 14.5 0.0145 Hypothalamus GCTAAAAAAA (7) 9.1 0.0091 Hypothalamus GATGCTGCCA (3) 3.6 0.0036 Hypothalamus ATTCCATCTT (3) 1.8 0.0018 Hypothalamus GACGCTGCCA 1.8 0.0018 Hypothalamus GCTACTGTCA 1.8 0.0018 Hypothalamus TAATAAAATG (5) 1.8 0.0018 Hypothalamus TGGTGGTCTT (2) 1.8 0.0018 Hypothalamus TTCAAGTTTT (4) 1.8 0.0018 Hypothalamus TTTTGTATCA (2) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina GATGCTGCCA (3) 35.7 0.0357 E12.5 retina TTCAAGTTTT (4) 11.3 0.0113 E12.5 retina GCAAAAAAAA (50) 9.4 0.0094 E12.5 retina GCTACTGTCA 7.5 0.0075 E12.5 retina GCGGCAGAGG 5.6 0.0056 E12.5 retina GCGCCTGTGA (6) 1.9 0.0019 E12.5 retina GGAAAAAAAA (69) 1.9 0.0019 E12.5 retina GTCCGGCGAT 1.9 0.0019 E12.5 retina TAATAAAATG (5) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina TTCAAGTTTT (4) 25.5 0.0255 E14.5 retina GATGCTGCCA (3) 16.4 0.0164 E14.5 retina GCAAAAAAAA (50) 12.8 0.0128 E14.5 retina GGAAAAAAAA (69) 10.9 0.0109 E14.5 retina GCTACTGTCA 5.5 0.0055 E14.5 retina ATTCCATCTT (3) 3.6 0.0036 E14.5 retina TAATAAAATG (5) 3.6 0.0036 E14.5 retina GTCCGGCGAT 1.8 0.0018 E14.5 retina TGGTGGTCTT (2) 1.8 0.0018 E14.5 retina TGTCAGCCAC 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GATGCTGCCA (3) 41.7 0.0417 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina TTCAAGTTTT (4) 18.1 0.0181 E16.5 retina GCAAAAAAAA (50) 10.9 0.0109 E16.5 retina ATTCCATCTT (3) 7.2 0.0072 E16.5 retina GCTACTGTCA 7.2 0.0072 E16.5 retina TGGTGGTCTT (2) 5.4 0.0054 E16.5 retina GTCCGGCGAT 3.6 0.0036 E16.5 retina GCTAAAAAAA (7) 1.8 0.0018 E16.5 retina GGAAAAAAAA (69) 1.8 0.0018 E16.5 retina TAATAAAATG (5) 1.8 0.0018 E16.5 retina TGTCAGCCAC 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina TTCAAGTTTT (4) 38.2 0.0382 E18.5 retina GCAAAAAAAA (50) 25.5 0.0255 E18.5 retina GGAAAAAAAA (69) 16.4 0.0164 E18.5 retina TAATAAAATG (5) 12.7 0.0127 E18.5 retina GATGCTGCCA (3) 10.9 0.0109 E18.5 retina GCGGCAGAGG 9.1 0.0091 E18.5 retina TGTCAGCCAC 3.6 0.0036 E18.5 retina GCTACTGTCA 1.8 0.0018 E18.5 retina TGCTGGCTCT (4) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina GATGCTGCCA (3) 29.4 0.0294 P0.5 retina TTCAAGTTTT (4) 21.6 0.0216 P0.5 retina GCAAAAAAAA (50) 17.7 0.0177 P0.5 retina GGAAAAAAAA (69) 13.7 0.0137 P0.5 retina GCTACTGTCA 5.9 0.0059 P0.5 retina ATTCCATCTT (3) 3.9 0.0039 P0.5 retina TGTCAGCCAC 3.9 0.0039 P0.5 retina TGCTGGCTCT (4) 2 0.002 P0.5 retina TGGTGGTCTT (2) 2 0.002 P0.5 retina TTTTGTATCA (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina GCAAAAAAAA (50) 22.9 0.0229 P2.5 retina TTCAAGTTTT (4) 14.1 0.0141 P2.5 retina GATGCTGCCA (3) 12.3 0.0123 P2.5 retina GGAAAAAAAA (69) 7 0.007 P2.5 retina GCGGCAGAGG 3.5 0.0035 P2.5 retina GCTACTGTCA 3.5 0.0035 P2.5 retina TGTCAGCCAC 3.5 0.0035 P2.5 retina TTTTGTATCA (2) 3.5 0.0035 P2.5 retina GCGCCTGTGA (6) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina GCAAAAAAAA (50) 25.8 0.0258 P4.5 retina TTCAAGTTTT (4) 15.9 0.0159 P4.5 retina GCTACTGTCA 13.9 0.0139 P4.5 retina GGAAAAAAAA (69) 13.9 0.0139 P4.5 retina GATGCTGCCA (3) 11.9 0.0119 P4.5 retina TTTTGTATCA (2) 5.9 0.0059 P4.5 retina GCGGCAGAGG 4 0.004 P4.5 retina TAATAAAATG (5) 4 0.004 P4.5 retina GCTAAAAAAA (7) 2 0.002 P4.5 retina TGTCAGCCAC 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina GGAAAAAAAA (69) 13.3 0.0133 P6.5 retina GCAAAAAAAA (50) 11.7 0.0117 P6.5 retina GCGGCAGAGG 6.7 0.0067 P6.5 retina GCTACTGTCA 6.7 0.0067 P6.5 retina GATGCTGCCA (3) 5 0.005 P6.5 retina TTTTGTATCA (2) 5 0.005 P6.5 retina CAGAGGTCAG 3.3 0.0033 P6.5 retina TAATAAAATG (5) 3.3 0.0033 P6.5 retina ATTCCATCTT (3) 1.7 0.0017 P6.5 retina GTCCGGCGAT 1.7 0.0017 P6.5 retina TTCAAGTTTT (4) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GACGCTGCCA 29.7 0.0297 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina GCAAAAAAAA (50) 5.6 0.0056 P10.5 crx- retina GGAAAAAAAA (69) 3.7 0.0037 P10.5 crx- retina TGTCAGCCAC 3.7 0.0037 P10.5 crx- retina GATGCTCCCA (2) 1.9 0.0019 P10.5 crx- retina GTCCTGCGAT (2) 1.9 0.0019 P10.5 crx- retina TAATAAAATG (5) 1.9 0.0019 P10.5 crx- retina TTCAAGTTTT (4) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina GGAAAAAAAA (69) 15.4 0.0154 P10.5 crx+ retina GACGCTGCCA 9.6 0.0096 P10.5 crx+ retina GCTACTGTCA 5.8 0.0058 P10.5 crx+ retina GTCCTGCGAT (2) 5.8 0.0058 P10.5 crx+ retina CAGAGGTCAG 1.9 0.0019 P10.5 crx+ retina GCAAAAAAAA (50) 1.9 0.0019 P10.5 crx+ retina GCGGCAGAGG 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal GATGCTGCCA (3) 16.7 0.0167 Adult retinal GCAAAAAAAA (50) 11.1 0.0111 Adult retinal GGAAAAAAAA (69) 5.6 0.0056 Adult retinal TTTTGTATCA (2) 5.6 0.0056 Adult retinal GCTACTGTCA 3.7 0.0037 Adult retinal TTCAAGTTTT (4) 3.7 0.0037 Adult retinal ATTCCATCTT (3) 1.9 0.0019 Adult retinal TGGTGGTCTT (2) 1.9 0.0019 Adult retinal TGTCAGCCAC 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL GGAAAAAAAA (69) 17.2 0.0172 ONL GATGCTGCCA (3) 9.6 0.0096 ONL ATTCCATCTT (3) 1.9 0.0019 ONL CAGAGGTCAG 1.9 0.0019 ONL GCAAAAAAAA (50) 1.9 0.0019 ONL GCTACTGTCA 1.9 0.0019 ONL TTTTGTATCA (2) 1.9 0.0019