Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3085	Plxnd1	plexin D1	6		67784
Gene Ontology	patterning of blood vessels | plasma membrane | protein binding | semaphorin receptor activity
Human Homolog	PLXND1[plexin D1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 22 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma GCTGCCCTGG (12) 6.9 0.0069 Cb medulloblastoma GGCTGCCTGG (14) 2.3 0.0023 P8 GC+1d culture GCTGCCCTGG (12) 2.3 0.0023 P8 GC+1d culture GGCAGTGCCC (2) 2.3 0.0023 P8 GC+1d culture GGCTGCCTGG (14) 1.1 0.0011 P8 GC+SHH+1d culture GGCAGTGCCC (2) 2.3 0.0023 P8 GC+SHH+1d culture CAGAACCCAG (2) 1.2 0.0012 P8 GC+SHH+1d culture GCTGCCCTGG (12) 1.2 0.0012 3T3 fibroblasts GCTGCCCTGG (12) 3.5 0.0035 E15 cortex GCTGCCCTGG (12) 4.9 0.0049 E15 cortex GGCTGCCTGG (14) 4.9 0.0049 Hypothalamus GCTGCCCTGG (12) 1.8 0.0018 Hypothalamus GGCTGCCTGG (14) 1.8 0.0018 E14.5 retina CAGAACCCAG (2) 1.8 0.0018 E14.5 retina GCTGCCCTGG (12) 1.8 0.0018 E16.5 retina GCTGCCCTGG (12) 1.8 0.0018 P0.5 retina GGCTGCCTGG (14) 3.9 0.0039 P2.5 retina GCTGCCCTGG (12) 3.5 0.0035 P10.5 crx+ retina CAGAACCCAG (2) 1.9 0.0019 P10.5 crx+ retina GGCTGCCTGG (14) 1.9 0.0019 Adult retinal GCTGCCCTGG (12) 3.7 0.0037 ONL GGCTGCCTGG (14) 1.9 0.0019