Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.314576	1110059H15Rik	RIKEN cDNA 1110059H15 gene	2		68795
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACTAAAAAA (12) 8.2 0.0082 P8 Cb GC TGGGTGCTGG (64) 8.2 0.0082 P8 Cb GC ATTTTCATCA (2) 3.3 0.0033 P8 Cb GC ATTTATGTGA 1.6 0.0016 P8 Cb GC TTTTTGAATA (3) 1.6 0.0016 Cb medulloblastoma TGGGTGCTGG (64) 9.2 0.0092 Cb medulloblastoma AACTAAAAAA (12) 2.3 0.0023 Cb medulloblastoma ATGTGACATT (3) 2.3 0.0023 P8 GC+1d culture TGGGTGCTGG (64) 5.7 0.0057 P8 GC+1d culture TACTGGTGTG (2) 3.4 0.0034 P8 GC+1d culture TTTTTGAATA (3) 3.4 0.0034 P8 GC+1d culture ATTTTCATCA (2) 2.3 0.0023 P8 GC+1d culture AACTAAAAAA (12) 1.1 0.0011 P8 GC+1d culture ATTTATGTGA 1.1 0.0011 P8 GC+SHH+1d culture AACTAAAAAA (12) 3.5 0.0035 P8 GC+SHH+1d culture ATTTTCATCA (2) 3.5 0.0035 P8 GC+SHH+1d culture TGGGTGCTGG (64) 3.5 0.0035 P8 GC+SHH+1d culture ATTTATGTGA 2.3 0.0023 P8 GC+SHH+1d culture ATGTGACATT (3) 1.2 0.0012 P8 GC+SHH+1d culture GGAAGAGGCC (3) 1.2 0.0012 P8 GC+SHH+1d culture TACTGGTGTG (2) 1.2 0.0012 3T3 fibroblasts TGGGTGCTGG (64) 17.5 0.0175 3T3 fibroblasts ATTTTCATCA (2) 3.5 0.0035 3T3 fibroblasts TTTTTGAATA (3) 3.5 0.0035 E15 cortex TGGGTGCTGG (64) 14.8 0.0148 E15 cortex TACTGGTGTG (2) 4.9 0.0049 P1 cortex TGGGTGCTGG (64) 13.6 0.0136 P1 cortex TACTGGTGTG (2) 9.1 0.0091 P1 cortex ATTTATGTGA 4.5 0.0045 Hypothalamus TGGGTGCTGG (64) 9.1 0.0091 Hypothalamus ATTTTCATCA (2) 1.8 0.0018 Hypothalamus GGAAGAGGCC (3) 1.8 0.0018 E12.5 retina TGGGTGCTGG (64) 9.4 0.0094 E12.5 retina ATTTTCATCA (2) 1.9 0.0019 E12.5 retina GAGAAGAGGA (5) 1.9 0.0019 E12.5 retina TACTGGTGTG (2) 1.9 0.0019 E12.5 retina TTTTTGAATA (3) 1.9 0.0019 E14.5 retina TGGGTGCTGG (64) 54.7 0.0547 E14.5 retina AACTAAAAAA (12) 3.6 0.0036 E14.5 retina TACTGGTGTG (2) 3.6 0.0036 E16.5 retina TGGGTGCTGG (64) 41.7 0.0417 E16.5 retina TACTGGTGTG (2) 3.6 0.0036 E16.5 retina GGAAGAGGCC (3) 1.8 0.0018 E16.5 retina TTTTTGAATA (3) 1.8 0.0018 E18.5 retina TGGGTGCTGG (64) 20 0.02 E18.5 retina AACTAAAAAA (12) 3.6 0.0036 E18.5 retina ATGTGACATT (3) 1.8 0.0018 P0.5 retina TGGGTGCTGG (64) 11.8 0.0118 P0.5 retina ATTTATGTGA 2 0.002 P0.5 retina ATTTTCATCA (2) 2 0.002 P2.5 retina TGGGTGCTGG (64) 17.6 0.0176 P2.5 retina ATGTGACATT (3) 3.5 0.0035 P2.5 retina GGAAGAGGCC (3) 1.8 0.0018 P2.5 retina TACTGGTGTG (2) 1.8 0.0018 P4.5 retina TGGGTGCTGG (64) 9.9 0.0099 P4.5 retina TTTTTGAATA (3) 4 0.004 P4.5 retina AACTAAAAAA (12) 2 0.002 P4.5 retina GAGAAGAGGA (5) 2 0.002 P4.5 retina TACTGGTGTG (2) 2 0.002 P6.5 retina TGGGTGCTGG (64) 13.3 0.0133 P6.5 retina ATTTATGTGA 3.3 0.0033 P6.5 retina GGAAGAGGCC (3) 1.7 0.0017 P6.5 retina TACTGGTGTG (2) 1.7 0.0017 P10.5 crx- retina TGGGTGCTGG (64) 20.4 0.0204 P10.5 crx- retina ATTTTCATCA (2) 14.9 0.0149 P10.5 crx- retina TACTGGTGTG (2) 9.3 0.0093 P10.5 crx+ retina TGGGTGCTGG (64) 15.4 0.0154 P10.5 crx+ retina AACTAAAAAA (12) 3.8 0.0038 P10.5 crx+ retina ATTTTCATCA (2) 3.8 0.0038 P10.5 crx+ retina TACTGGTGTG (2) 3.8 0.0038 P10.5 crx+ retina ATGTGACATT (3) 1.9 0.0019 P10.5 crx+ retina ATTTATGTGA 1.9 0.0019 P10.5 crx+ retina GAGAAGAGGA (5) 1.9 0.0019 P10.5 crx+ retina GGAAGAGGCC (3) 1.9 0.0019 P10.5 crx+ retina TTTTTGAATA (3) 1.9 0.0019 Adult retinal TGGGTGCTGG (64) 13 0.013 Adult retinal TACTGGTGTG (2) 3.7 0.0037 Adult retinal GAGAAGAGGA (5) 1.9 0.0019 ONL TGGGTGCTGG (64) 40.2 0.0402 ONL AACTAAAAAA (12) 5.7 0.0057 ONL ATTTATGTGA 3.8 0.0038 ONL ATTTTCATCA (2) 3.8 0.0038 ONL TACTGGTGTG (2) 3.8 0.0038 ONL ATGTGACATT (3) 1.9 0.0019