Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.32842	5330401F18Rik	RIKEN cDNA 5330401F18 gene	9		319219
Mm.32842	Nktr	natural killer tumor recognition sequence	9	9 71.0 cM	18087
Gene Ontology	integral to membrane | isomerase activity | peptidyl-prolyl cis-trans isomerase activity | protein folding
Human Homolog	NKTR[natural killer-tumor recognition sequence]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 114 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCTCTGGAG (6) 8.2 0.0082 P8 Cb GC CTGAGTTTGA (3) 6.5 0.0065 P8 Cb GC CTGCAGGGTT (3) 3.3 0.0033 P8 Cb GC AGGAGGAGGA (16) 1.6 0.0016 P8 Cb GC GTGGCACAGG (10) 1.6 0.0016 P8 Cb GC TGTCTTAGAG (3) 1.6 0.0016 Cb medulloblastoma CTGAGTTTGA (3) 18.5 0.0185 Cb medulloblastoma GCAGCCAGCA (5) 2.3 0.0023 Cb medulloblastoma TGACCAAGCC (8) 2.3 0.0023 Cb medulloblastoma TGCTCTGGAG (6) 2.3 0.0023 P8 GC+1d culture CTGAGTTTGA (3) 6.8 0.0068 P8 GC+1d culture TGCTCTGGAG (6) 5.7 0.0057 P8 GC+1d culture TGGGTGTTCT (2) 2.3 0.0023 P8 GC+1d culture TGTCTTAGAG (3) 2.3 0.0023 P8 GC+1d culture CCTGCAATCC (7) 1.1 0.0011 P8 GC+1d culture CTGCAGGGTT (3) 1.1 0.0011 P8 GC+1d culture GTGGCACAGG (10) 1.1 0.0011 P8 GC+1d culture TTCAGTAATG (8) 1.1 0.0011 P8 GC+SHH+1d culture TGCTCTGGAG (6) 5.9 0.0059 P8 GC+SHH+1d culture CTGAGTTTGA (3) 4.7 0.0047 P8 GC+SHH+1d culture CTGTGTTTAA (3) 2.3 0.0023 P8 GC+SHH+1d culture AGGAGGAGGA (16) 1.2 0.0012 P8 GC+SHH+1d culture TTCAGTAATG (8) 1.2 0.0012 3T3 fibroblasts CCTGCAATCC (7) 14 0.014 3T3 fibroblasts CCTGCGATCC (2) 3.5 0.0035 3T3 fibroblasts GTGGCACAGG (10) 3.5 0.0035 3T3 fibroblasts TGCTCTGGAG (6) 3.5 0.0035 E15 cortex CTGTGTTTAA (3) 9.9 0.0099 E15 cortex CTGAGTTTGA (3) 4.9 0.0049 E15 cortex GGGAAAGGGG (17) 4.9 0.0049 E15 cortex TGCTCTGGAG (6) 4.9 0.0049 E15 cortex TTGTTTTTGG (4) 4.9 0.0049 P1 cortex TTGTTTTTGG (4) 9.1 0.0091 P1 cortex CTGAGTTTGA (3) 4.5 0.0045 P1 cortex TGCTCTGGAG (6) 4.5 0.0045 P1 cortex TTCAGTAATG (8) 4.5 0.0045 Hypothalamus CTGAGTTTGA (3) 16.3 0.0163 Hypothalamus TGCTCTGGAG (6) 7.2 0.0072 Hypothalamus TGGGTGTTCT (2) 1.8 0.0018 E12.5 retina CTGAGTTTGA (3) 9.4 0.0094 E12.5 retina GGGAAAGGGG (17) 3.8 0.0038 E12.5 retina AACCACCACA (12) 1.9 0.0019 E12.5 retina GTGGCACAGG (10) 1.9 0.0019 E12.5 retina TGACCAAGCC (8) 1.9 0.0019 E12.5 retina TTCAGTAATG (8) 1.9 0.0019 E12.5 retina TTGTTTTTGG (4) 1.9 0.0019 E14.5 retina CTGAGTTTGA (3) 3.6 0.0036 E14.5 retina GTGGCACAGG (10) 1.8 0.0018 E14.5 retina TCTGAAAGCA (2) 1.8 0.0018 E14.5 retina TTCAGTAATG (8) 1.8 0.0018 E16.5 retina CTGAGTTTGA (3) 10.9 0.0109 E16.5 retina CAGCAGTAGG (2) 1.8 0.0018 E16.5 retina CTGTGTTTAA (3) 1.8 0.0018 E16.5 retina GGGAAAGGGG (17) 1.8 0.0018 E18.5 retina CTGAGTTTGA (3) 3.6 0.0036 E18.5 retina GTGGCACAGG (10) 3.6 0.0036 E18.5 retina AACCACCACA (12) 1.8 0.0018 E18.5 retina CCTGCGATCC (2) 1.8 0.0018 E18.5 retina TGACCAAGCC (8) 1.8 0.0018 P0.5 retina GTGGCACAGG (10) 5.9 0.0059 P0.5 retina TTCAGTAATG (8) 5.9 0.0059 P0.5 retina CTGAGTTTGA (3) 3.9 0.0039 P0.5 retina TTGTTTTTGG (4) 3.9 0.0039 P0.5 retina AACCACCACA (12) 2 0.002 P0.5 retina AGGAGGAGGA (16) 2 0.002 P0.5 retina CCTGCAATCC (7) 2 0.002 P0.5 retina CCTGCGATCC (2) 2 0.002 P0.5 retina TGACCAAGCC (8) 2 0.002 P0.5 retina TGCTCTGGAG (6) 2 0.002 P2.5 retina CTGAGTTTGA (3) 24.6 0.0246 P2.5 retina TTCAGTAATG (8) 3.5 0.0035 P2.5 retina AACCACCACA (12) 1.8 0.0018 P2.5 retina GTGGCACAGG (10) 1.8 0.0018 P2.5 retina TGACCAAGCC (8) 1.8 0.0018 P2.5 retina TGCTCTGGAG (6) 1.8 0.0018 P2.5 retina TTGTTTTTGG (4) 1.8 0.0018 P4.5 retina CTGAGTTTGA (3) 11.9 0.0119 P4.5 retina TTCAGTAATG (8) 4 0.004 P4.5 retina CCTGCAATCC (7) 2 0.002 P4.5 retina GTGGCACAGG (10) 2 0.002 P4.5 retina TGCTCTGGAG (6) 2 0.002 P4.5 retina TGTCTTAGAG (3) 2 0.002 P6.5 retina CTGAGTTTGA (3) 26.7 0.0267 P6.5 retina TGCTCTGGAG (6) 5 0.005 P6.5 retina TCTGAAAGCA (2) 3.3 0.0033 P6.5 retina TTCAGTAATG (8) 3.3 0.0033 P6.5 retina CTGTGTTTAA (3) 1.7 0.0017 P6.5 retina GTGGCACAGG (10) 1.7 0.0017 P10.5 crx- retina CTGAGTTTGA (3) 9.3 0.0093 P10.5 crx- retina CAGCAGTAGG (2) 3.7 0.0037 P10.5 crx- retina TTCAGTAATG (8) 3.7 0.0037 P10.5 crx- retina CTGTGTTTAA (3) 1.9 0.0019 P10.5 crx- retina GTGGCACAGG (10) 1.9 0.0019 P10.5 crx- retina TGCTCTGGAG (6) 1.9 0.0019 P10.5 crx- retina TTGTTTTTGG (4) 1.9 0.0019 P10.5 crx+ retina CTGAGTTTGA (3) 28.8 0.0288 P10.5 crx+ retina TGCTCTGGAG (6) 13.5 0.0135 P10.5 crx+ retina GTGGCACAGG (10) 9.6 0.0096 P10.5 crx+ retina TTCAGTAATG (8) 7.7 0.0077 P10.5 crx+ retina AGGAGGAGGA (16) 3.8 0.0038 P10.5 crx+ retina CCTGCAATCC (7) 3.8 0.0038 P10.5 crx+ retina CCTGCGATCC (2) 1.9 0.0019 P10.5 crx+ retina GCAGCCAGCA (5) 1.9 0.0019 Adult retinal CTGAGTTTGA (3) 16.7 0.0167 Adult retinal GTGGCACAGG (10) 11.1 0.0111 Adult retinal TGCTCTGGAG (6) 5.6 0.0056 Adult retinal ACACTGAATT (2) 3.7 0.0037 Adult retinal CCTGCAATCC (7) 1.9 0.0019 Adult retinal CTGTGTTTAA (3) 1.9 0.0019 ONL CTGAGTTTGA (3) 9.6 0.0096 ONL ACACTGAATT (2) 3.8 0.0038 ONL CCTGCAATCC (7) 1.9 0.0019 ONL GTGGCACAGG (10) 1.9 0.0019 ONL TGCTCTGGAG (6) 1.9 0.0019