Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.32842	5330401F18Rik	RIKEN cDNA 5330401F18 gene	9		319219
Mm.32842	Nktr	natural killer tumor recognition sequence	9	9 71.0 cM	18087
Gene Ontology	integral to membrane | isomerase activity | peptidyl-prolyl cis-trans isomerase activity | protein folding
Human Homolog	NKTR[natural killer-tumor recognition sequence]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGAGTTTGA (3) 6.5 0.0065 P8 Cb GC CTGCAGGGTT (3) 3.3 0.0033 Cb medulloblastoma CTGAGTTTGA (3) 18.5 0.0185 Cb medulloblastoma GCAGCCAGCA (2) 2.3 0.0023 P8 GC+1d culture CTGAGTTTGA (3) 6.8 0.0068 P8 GC+1d culture CTGCAGGGTT (3) 1.1 0.0011 P8 GC+1d culture TTCAGTAATG (3) 1.1 0.0011 P8 GC+SHH+1d culture CTGAGTTTGA (3) 4.7 0.0047 P8 GC+SHH+1d culture TTCAGTAATG (3) 1.2 0.0012 3T3 fibroblasts CCTGCGATCC (2) 3.5 0.0035 E15 cortex CTGAGTTTGA (3) 4.9 0.0049 E15 cortex TTGTTTTTGG (3) 4.9 0.0049 P1 cortex TTGTTTTTGG (3) 9.1 0.0091 P1 cortex CTGAGTTTGA (3) 4.5 0.0045 P1 cortex TTCAGTAATG (3) 4.5 0.0045 Hypothalamus CTGAGTTTGA (3) 16.3 0.0163 E12.5 retina CTGAGTTTGA (3) 9.4 0.0094 E12.5 retina AACCACCACA (2) 1.9 0.0019 E12.5 retina TTCAGTAATG (3) 1.9 0.0019 E12.5 retina TTGTTTTTGG (3) 1.9 0.0019 E14.5 retina CTGAGTTTGA (3) 3.6 0.0036 E14.5 retina TCTGAAAGCA (2) 1.8 0.0018 E14.5 retina TTCAGTAATG (3) 1.8 0.0018 E16.5 retina CTGAGTTTGA (3) 10.9 0.0109 E16.5 retina CAGCAGTAGG (2) 1.8 0.0018 E18.5 retina CTGAGTTTGA (3) 3.6 0.0036 E18.5 retina AACCACCACA (2) 1.8 0.0018 E18.5 retina CCTGCGATCC (2) 1.8 0.0018 P0.5 retina TTCAGTAATG (3) 5.9 0.0059 P0.5 retina CTGAGTTTGA (3) 3.9 0.0039 P0.5 retina TTGTTTTTGG (3) 3.9 0.0039 P0.5 retina AACCACCACA (2) 2 0.002 P0.5 retina CCTGCGATCC (2) 2 0.002 P2.5 retina CTGAGTTTGA (3) 24.6 0.0246 P2.5 retina TTCAGTAATG (3) 3.5 0.0035 P2.5 retina AACCACCACA (2) 1.8 0.0018 P2.5 retina TTGTTTTTGG (3) 1.8 0.0018 P4.5 retina CTGAGTTTGA (3) 11.9 0.0119 P4.5 retina TTCAGTAATG (3) 4 0.004 P6.5 retina CTGAGTTTGA (3) 26.7 0.0267 P6.5 retina TCTGAAAGCA (2) 3.3 0.0033 P6.5 retina TTCAGTAATG (3) 3.3 0.0033 P10.5 crx- retina CTGAGTTTGA (3) 9.3 0.0093 P10.5 crx- retina CAGCAGTAGG (2) 3.7 0.0037 P10.5 crx- retina TTCAGTAATG (3) 3.7 0.0037 P10.5 crx- retina TTGTTTTTGG (3) 1.9 0.0019 P10.5 crx+ retina CTGAGTTTGA (3) 28.8 0.0288 P10.5 crx+ retina TTCAGTAATG (3) 7.7 0.0077 P10.5 crx+ retina CCTGCGATCC (2) 1.9 0.0019 P10.5 crx+ retina GCAGCCAGCA (2) 1.9 0.0019 Adult retinal CTGAGTTTGA (3) 16.7 0.0167 ONL CTGAGTTTGA (3) 9.6 0.0096