Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.329194
AI181996
expressed sequence AI181996
17
106531
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 52 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTTAAAAAAA (
26
)
4.9
0.0049
P8 Cb GC
GTTCAAAAAA
(
2
)
3.3
0.0033
Cb medulloblastoma
GTTAAAAAAA (
26
)
25.4
0.0254
Cb medulloblastoma
GTTCAAAAAA
(
2
)
6.9
0.0069
Cb medulloblastoma
CTCCCATCCT (
6
)
2.3
0.0023
P8 GC+1d culture
GTTAAAAAAA (
26
)
13.7
0.0137
P8 GC+1d culture
GTTCAAAAAA
(
2
)
2.3
0.0023
P8 GC+1d culture
CTCCCATCCT (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
GTTAAAAAAA (
26
)
16.4
0.0164
P8 GC+SHH+1d culture
GTTCAAAAAA
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
CTCCCATCCT (
6
)
1.2
0.0012
3T3 fibroblasts
CTCCCATCCT (
6
)
7
0.007
E15 cortex
TAATTCACTC
(
2
)
4.9
0.0049
P1 cortex
GTTAAAAAAA (
26
)
4.5
0.0045
P1 cortex
GTTCAAAAAA
(
2
)
4.5
0.0045
P1 cortex
TTAAAAAATA (
5
)
4.5
0.0045
Hypothalamus
GTTAAAAAAA (
26
)
9.1
0.0091
Hypothalamus
GTTCAAAAAA
(
2
)
7.2
0.0072
Hypothalamus
CTCCCATCCT (
6
)
1.8
0.0018
Hypothalamus
GAGAAGGGAG
(
6
)
1.8
0.0018
Hypothalamus
TAATTCACTC
(
2
)
1.8
0.0018
Hypothalamus
TTAAAAAATA (
5
)
1.8
0.0018
E12.5 retina
GTTAAAAAAA (
26
)
3.8
0.0038
E12.5 retina
GTTCAAAAAA
(
2
)
3.8
0.0038
E14.5 retina
GTTAAAAAAA (
26
)
20
0.02
E14.5 retina
GTTCAAAAAA
(
2
)
1.8
0.0018
E16.5 retina
GTTAAAAAAA (
26
)
16.3
0.0163
E16.5 retina
GTTCAAAAAA
(
2
)
10.9
0.0109
E18.5 retina
GTTAAAAAAA (
26
)
27.3
0.0273
E18.5 retina
GTTCAAAAAA
(
2
)
7.3
0.0073
P0.5 retina
GTTAAAAAAA (
26
)
3.9
0.0039
P0.5 retina
GTTCAAAAAA
(
2
)
3.9
0.0039
P2.5 retina
GTTAAAAAAA (
26
)
7
0.007
P2.5 retina
GTTCAAAAAA
(
2
)
1.8
0.0018
P2.5 retina
TTAAAAAATA (
5
)
1.8
0.0018
P4.5 retina
GTTAAAAAAA (
26
)
11.9
0.0119
P4.5 retina
GTTCAAAAAA
(
2
)
5.9
0.0059
P4.5 retina
CTCCCATCCT (
6
)
2
0.002
P6.5 retina
GTTAAAAAAA (
26
)
15
0.015
P6.5 retina
GTTCAAAAAA
(
2
)
5
0.005
P6.5 retina
GAGAAGGGAG
(
6
)
1.7
0.0017
P10.5 crx- retina
GTTAAAAAAA (
26
)
5.6
0.0056
P10.5 crx- retina
GAGAAGGGAG
(
6
)
3.7
0.0037
P10.5 crx- retina
CTCCCATCCT (
6
)
1.9
0.0019
P10.5 crx- retina
GTTCAAAAAA
(
2
)
1.9
0.0019
P10.5 crx+ retina
GTTAAAAAAA (
26
)
15.4
0.0154
P10.5 crx+ retina
CTCCCATCCT (
6
)
1.9
0.0019
P10.5 crx+ retina
GAGAAGGGAG
(
6
)
1.9
0.0019
P10.5 crx+ retina
GTTCAAAAAA
(
2
)
1.9
0.0019
Adult retinal
CTCCCATCCT (
6
)
5.6
0.0056
Adult retinal
GTTCAAAAAA
(
2
)
1.9
0.0019
ONL
GTTAAAAAAA (
26
)
3.8
0.0038
