Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.331
Ubc
ubiquitin C
5
5 64.0 cM
22190
Mm.331
AV046995
expressed sequence AV046995
15
105994
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 247 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGATCTTTG
(
6
)
34.3
0.0343
P8 Cb GC
GGGAAGTCTG (
4
)
31
0.031
P8 Cb GC
GAGGGCATCC (
4
)
14.7
0.0147
P8 Cb GC
TCAGATCTTT
(
2
)
13.1
0.0131
P8 Cb GC
CCTGCAAGGA (
4
)
9.8
0.0098
P8 Cb GC
AGGGTGGCGG (
5
)
6.5
0.0065
P8 Cb GC
CAGAACTTTG (
3
)
4.9
0.0049
P8 Cb GC
GGCACAAGGT (
4
)
4.9
0.0049
P8 Cb GC
ATGCTGGGCT (
3
)
3.3
0.0033
P8 Cb GC
CAGATCTTCG (
9
)
3.3
0.0033
P8 Cb GC
ACACCATAGA
(
2
)
1.6
0.0016
P8 Cb GC
ACGAACCTGG (
3
)
1.6
0.0016
P8 Cb GC
CAACAAAACC (
8
)
1.6
0.0016
P8 Cb GC
CCACCTCTCA (
3
)
1.6
0.0016
P8 Cb GC
GCCGGCAGCC
(
2
)
1.6
0.0016
Cb medulloblastoma
GAGGGCATCC (
4
)
32.4
0.0324
Cb medulloblastoma
CCTGCAAGGA (
4
)
11.6
0.0116
Cb medulloblastoma
CAACAAAACC (
8
)
9.2
0.0092
Cb medulloblastoma
CAGATCTTTG
(
6
)
9.2
0.0092
Cb medulloblastoma
GGGGGGGGGG (
112
)
6.9
0.0069
Cb medulloblastoma
ACGAACCTGG (
3
)
4.6
0.0046
Cb medulloblastoma
AGGGTGGCGG (
5
)
4.6
0.0046
Cb medulloblastoma
GGGAAGTCTG (
4
)
4.6
0.0046
Cb medulloblastoma
ACACCATAGA
(
2
)
2.3
0.0023
Cb medulloblastoma
CAGAACTTTG (
3
)
2.3
0.0023
Cb medulloblastoma
CCACCTCTGA
(
2
)
2.3
0.0023
Cb medulloblastoma
TTATCCTTTT (
3
)
2.3
0.0023
P8 GC+1d culture
CAGATCTTTG
(
6
)
41.1
0.0411
P8 GC+1d culture
GGGAAGTCTG (
4
)
19.4
0.0194
P8 GC+1d culture
CAGATCTTCG (
9
)
17.1
0.0171
P8 GC+1d culture
GAGGGCATCC (
4
)
11.4
0.0114
P8 GC+1d culture
CCTGCAAGGA (
4
)
8
0.008
P8 GC+1d culture
TCAGATCTTT
(
2
)
5.7
0.0057
P8 GC+1d culture
AACATCAAGC (
4
)
3.4
0.0034
P8 GC+1d culture
CAGAACTTTG (
3
)
3.4
0.0034
P8 GC+1d culture
CCACCTCTCA (
3
)
3.4
0.0034
P8 GC+1d culture
CCACCTCTGA
(
2
)
2.3
0.0023
P8 GC+1d culture
GGGGGGGGGG (
112
)
2.3
0.0023
P8 GC+1d culture
AAATAAACCT (
3
)
1.1
0.0011
P8 GC+1d culture
AGGGTGGCGG (
5
)
1.1
0.0011
P8 GC+1d culture
CACAGGCCTG (
8
)
1.1
0.0011
P8 GC+1d culture
CATTCCAAAG (
7
)
1.1
0.0011
P8 GC+1d culture
CCAGCTCTAA (
4
)
1.1
0.0011
P8 GC+1d culture
GTTTGAGAAC (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
CAGATCTTTG
(
6
)
42.2
0.0422
P8 GC+SHH+1d culture
GAGGGCATCC (
4
)
21.1
0.0211
P8 GC+SHH+1d culture
GGGAAGTCTG (
4
)
12.9
0.0129
P8 GC+SHH+1d culture
CAACAAAACC (
8
)
7
0.007
P8 GC+SHH+1d culture
CAGATCTTCG (
9
)
7
0.007
P8 GC+SHH+1d culture
GGGGGGGGGG (
112
)
7
0.007
P8 GC+SHH+1d culture
CCTGCAAGGA (
4
)
5.9
0.0059
P8 GC+SHH+1d culture
CAGAACTTTG (
3
)
3.5
0.0035
P8 GC+SHH+1d culture
CCACCTCTCA (
3
)
2.3
0.0023
P8 GC+SHH+1d culture
GCCAGGACCC (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
GTTTGAGAAC (
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TCAGATCTTT
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
AAGATCTTTG (
7
)
1.2
0.0012
P8 GC+SHH+1d culture
ACAAGAGATT (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
AGGGTGGCGG (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
CACAGGCCTG (
8
)
1.2
0.0012
P8 GC+SHH+1d culture
CAGATTTTTC
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
CCAGCTCTAA (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GCCGGCAGCC
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GTCTCTTGGG (
3
)
1.2
0.0012
3T3 fibroblasts
GGGAAGTCTG (
4
)
56.1
0.0561
3T3 fibroblasts
CCTGCAAGGA (
4
)
21
0.021
3T3 fibroblasts
GAGGGCATCC (
4
)
21
0.021
3T3 fibroblasts
AGGGTGGCGG (
5
)
14
0.014
3T3 fibroblasts
CAGATCTTTG
(
6
)
7
0.007
3T3 fibroblasts
CCACCTCTCA (
3
)
3.5
0.0035
3T3 fibroblasts
CCACCTCTGA
(
2
)
3.5
0.0035
3T3 fibroblasts
GGGGGGGGGG (
112
)
3.5
0.0035
E15 cortex
CAGATCTTTG
(
6
)
24.7
0.0247
E15 cortex
CAGATCTTCG (
9
)
19.8
0.0198
E15 cortex
ACGAACCTGG (
3
)
4.9
0.0049
E15 cortex
CAGAACTTTG (
3
)
4.9
0.0049
E15 cortex
CCTGCAAGGA (
4
)
4.9
0.0049
E15 cortex
GAGGGCATCC (
4
)
4.9
0.0049
E15 cortex
GGGAAGTCTG (
4
)
4.9
0.0049
E15 cortex
GGGGGGGGGG (
112
)
4.9
0.0049
E15 cortex
TGACCTCGGG
(
2
)
4.9
0.0049
P1 cortex
CAGATCTTTG
(
6
)
40.9
0.0409
P1 cortex
AAACACAGGA (
6
)
9.1
0.0091
P1 cortex
GAGGGCATCC (
4
)
9.1
0.0091
P1 cortex
GTCTCTTGGG (
3
)
9.1
0.0091
P1 cortex
CAACAAAACC (
8
)
4.5
0.0045
P1 cortex
CAGATCTTCG (
9
)
4.5
0.0045
P1 cortex
GGGAAGTCTG (
4
)
4.5
0.0045
Hypothalamus
CAACAAAACC (
8
)
29
0.029
Hypothalamus
CAGATCTTCG (
9
)
25.4
0.0254
Hypothalamus
CAGATCTTTG
(
6
)
14.5
0.0145
Hypothalamus
GAGGGCATCC (
4
)
14.5
0.0145
Hypothalamus
CCACCTCTCA (
3
)
12.7
0.0127
Hypothalamus
CCACCTCTGA
(
2
)
3.6
0.0036
Hypothalamus
CCTGCAAGGA (
4
)
3.6
0.0036
Hypothalamus
AGGGTGGCGG (
5
)
1.8
0.0018
Hypothalamus
GCCGGCAGCC
(
2
)
1.8
0.0018
Hypothalamus
GGGAAGTCTG (
4
)
1.8
0.0018
Hypothalamus
GGGGGGGGGG (
112
)
1.8
0.0018
Hypothalamus
TGACCTCGGG
(
2
)
1.8
0.0018
E12.5 retina
CAGATCTTTG
(
6
)
26.3
0.0263
E12.5 retina
GAGGGCATCC (
4
)
20.7
0.0207
E12.5 retina
CAACAAAACC (
8
)
3.8
0.0038
E12.5 retina
CCTGCAAGGA (
4
)
3.8
0.0038
E12.5 retina
CACAGGCCTG (
8
)
1.9
0.0019
E12.5 retina
CAGATCTTCG (
9
)
1.9
0.0019
E12.5 retina
TGACCTCGGG
(
2
)
1.9
0.0019
E14.5 retina
CAACAAAACC (
8
)
31
0.031
E14.5 retina
AGGGTGGCGG (
5
)
18.2
0.0182
E14.5 retina
CCACCTCTCA (
3
)
14.6
0.0146
E14.5 retina
CAGATCTTTG
(
6
)
10.9
0.0109
E14.5 retina
GAGGGCATCC (
4
)
9.1
0.0091
E14.5 retina
CAGATCTTCG (
9
)
3.6
0.0036
E14.5 retina
CAGAACTTTG (
3
)
1.8
0.0018
E14.5 retina
CCTGCAAGGA (
4
)
1.8
0.0018
E14.5 retina
GCCAGGACCC (
6
)
1.8
0.0018
E14.5 retina
GCCGGCAGCC
(
2
)
1.8
0.0018
E14.5 retina
GGGAAGTCTG (
4
)
1.8
0.0018
E14.5 retina
GTTTGAGAAC (
3
)
1.8
0.0018
E14.5 retina
TCAGATCTTT
(
2
)
1.8
0.0018
E14.5 retina
TGACCTCGGG
(
2
)
1.8
0.0018
E14.5 retina
TTATCCTTTT (
3
)
1.8
0.0018
E16.5 retina
CAACAAAACC (
8
)
47.1
0.0471
E16.5 retina
CAGATCTTTG
(
6
)
19.9
0.0199
E16.5 retina
CCACCTCTCA (
3
)
19.9
0.0199
E16.5 retina
CAGATCTTCG (
9
)
12.7
0.0127
E16.5 retina
GAGGGCATCC (
4
)
12.7
0.0127
E16.5 retina
AGGGTGGCGG (
5
)
9.1
0.0091
E16.5 retina
CCACCTCTGA
(
2
)
7.2
0.0072
E16.5 retina
CCTGCAAGGA (
4
)
5.4
0.0054
E16.5 retina
AAACACAGGA (
6
)
1.8
0.0018
E16.5 retina
AAATAAACCT (
3
)
1.8
0.0018
E16.5 retina
ACGAACCTGG (
3
)
1.8
0.0018
E16.5 retina
CACAGGCCTG (
8
)
1.8
0.0018
E16.5 retina
GCCAGGACCC (
6
)
1.8
0.0018
E16.5 retina
GTCTCTTGGG (
3
)
1.8
0.0018
E18.5 retina
CAGATCTTTG
(
6
)
12.7
0.0127
E18.5 retina
GAGGGCATCC (
4
)
10.9
0.0109
E18.5 retina
AGGGTGGCGG (
5
)
9.1
0.0091
E18.5 retina
CAACAAAACC (
8
)
9.1
0.0091
E18.5 retina
CCACCTCTCA (
3
)
7.3
0.0073
E18.5 retina
GGGAAGTCTG (
4
)
3.6
0.0036
E18.5 retina
AAATAAACCT (
3
)
1.8
0.0018
E18.5 retina
AACATCAAGC (
4
)
1.8
0.0018
E18.5 retina
CAGATCTTCG (
9
)
1.8
0.0018
E18.5 retina
CCTGCAAGGA (
4
)
1.8
0.0018
E18.5 retina
TGACCTCGGG
(
2
)
1.8
0.0018
P0.5 retina
CAGATCTTTG
(
6
)
35.3
0.0353
P0.5 retina
CAGATCTTCG (
9
)
19.6
0.0196
P0.5 retina
GAGGGCATCC (
4
)
13.7
0.0137
P0.5 retina
CCACCTCTCA (
3
)
9.8
0.0098
P0.5 retina
CAACAAAACC (
8
)
7.9
0.0079
P0.5 retina
CCTGCAAGGA (
4
)
7.9
0.0079
P0.5 retina
GGCACAAGGT (
4
)
3.9
0.0039
P0.5 retina
AGGGTGGCGG (
5
)
2
0.002
P0.5 retina
CACAGGCCTG (
8
)
2
0.002
P0.5 retina
CCAGGAATTT (
4
)
2
0.002
P0.5 retina
GGGAAGTCTG (
4
)
2
0.002
P0.5 retina
GTTTGAGAAC (
3
)
2
0.002
P2.5 retina
CAGATCTTTG
(
6
)
26.4
0.0264
P2.5 retina
GAGGGCATCC (
4
)
15.8
0.0158
P2.5 retina
CCTGCAAGGA (
4
)
12.3
0.0123
P2.5 retina
GGGGGGGGGG (
112
)
7
0.007
P2.5 retina
CAGATCTTCG (
9
)
3.5
0.0035
P2.5 retina
CCACCTCTCA (
3
)
3.5
0.0035
P2.5 retina
GGCACAAGGT (
4
)
3.5
0.0035
P2.5 retina
GGGAAGTCTG (
4
)
3.5
0.0035
P2.5 retina
ACGAACCTGG (
3
)
1.8
0.0018
P2.5 retina
AGGGTGGCGG (
5
)
1.8
0.0018
P2.5 retina
CAACAAAACC (
8
)
1.8
0.0018
P2.5 retina
CAGAACTTTG (
3
)
1.8
0.0018
P4.5 retina
CCTGCAAGGA (
4
)
19.8
0.0198
P4.5 retina
GAGGGCATCC (
4
)
15.9
0.0159
P4.5 retina
CAACAAAACC (
8
)
13.9
0.0139
P4.5 retina
GGGGGGGGGG (
112
)
9.9
0.0099
P4.5 retina
CAGATCTTTG
(
6
)
7.9
0.0079
P4.5 retina
CATTCCAAAG (
7
)
5.9
0.0059
P4.5 retina
CAGATCTTCG (
9
)
4
0.004
P4.5 retina
AACATCAAGC (
4
)
2
0.002
P4.5 retina
AGGGTGGCGG (
5
)
2
0.002
P4.5 retina
GCCAGGACCC (
6
)
2
0.002
P6.5 retina
CAGATCTTTG
(
6
)
23.3
0.0233
P6.5 retina
CCTGCAAGGA (
4
)
11.7
0.0117
P6.5 retina
GAGGGCATCC (
4
)
8.3
0.0083
P6.5 retina
CCACCTCTCA (
3
)
6.7
0.0067
P6.5 retina
GGGAAGTCTG (
4
)
6.7
0.0067
P6.5 retina
CAGATCTTCG (
9
)
5
0.005
P6.5 retina
GGGGGGGGGG (
112
)
3.3
0.0033
P6.5 retina
AAACACAGGA (
6
)
1.7
0.0017
P6.5 retina
ACAAGAGATT (
3
)
1.7
0.0017
P6.5 retina
CAACAAAACC (
8
)
1.7
0.0017
P6.5 retina
CCAGGAATTT (
4
)
1.7
0.0017
P6.5 retina
GCCAGGACCC (
6
)
1.7
0.0017
P6.5 retina
GGCACAAGGT (
4
)
1.7
0.0017
P6.5 retina
TTATCCTTTT (
3
)
1.7
0.0017
P10.5 crx- retina
GGGAAGTCTG (
4
)
57.6
0.0576
P10.5 crx- retina
CCACCTCTCA (
3
)
37.2
0.0372
P10.5 crx- retina
CAACAAAACC (
8
)
33.4
0.0334
P10.5 crx- retina
CAGATCTTCG (
9
)
20.4
0.0204
P10.5 crx- retina
GAGGGCATCC (
4
)
13
0.013
P10.5 crx- retina
CCTGCAAGGA (
4
)
11.1
0.0111
P10.5 crx- retina
AGGGTGGCGG (
5
)
3.7
0.0037
P10.5 crx- retina
CACAGGCCTG (
8
)
3.7
0.0037
P10.5 crx- retina
CAGATCTTTG
(
6
)
3.7
0.0037
P10.5 crx- retina
GTTTGAGAAC (
3
)
3.7
0.0037
P10.5 crx- retina
AACATCAAGC (
4
)
1.9
0.0019
P10.5 crx- retina
ACGAACCTGG (
3
)
1.9
0.0019
P10.5 crx- retina
ATGCTGGGCT (
3
)
1.9
0.0019
P10.5 crx- retina
CCACCTCTGA
(
2
)
1.9
0.0019
P10.5 crx- retina
CCAGGAATTT (
4
)
1.9
0.0019
P10.5 crx- retina
TTATCCTTTT (
3
)
1.9
0.0019
P10.5 crx+ retina
GGGAAGTCTG (
4
)
30.8
0.0308
P10.5 crx+ retina
CCTGCAAGGA (
4
)
13.5
0.0135
P10.5 crx+ retina
GAGGGCATCC (
4
)
13.5
0.0135
P10.5 crx+ retina
CAGATCTTTG
(
6
)
9.6
0.0096
P10.5 crx+ retina
GGGGGGGGGG (
112
)
9.6
0.0096
P10.5 crx+ retina
CAACAAAACC (
8
)
7.7
0.0077
P10.5 crx+ retina
CCACCTCTCA (
3
)
7.7
0.0077
P10.5 crx+ retina
AGGGTGGCGG (
5
)
3.8
0.0038
P10.5 crx+ retina
CAGATCTTCG (
9
)
3.8
0.0038
P10.5 crx+ retina
ACGAACCTGG (
3
)
1.9
0.0019
P10.5 crx+ retina
GGCACAAGGT (
4
)
1.9
0.0019
P10.5 crx+ retina
TGACCTCGGG
(
2
)
1.9
0.0019
Adult retinal
CAGATCTTTG
(
6
)
25.9
0.0259
Adult retinal
GAGGGCATCC (
4
)
18.5
0.0185
Adult retinal
CACAGGCCTG (
8
)
7.4
0.0074
Adult retinal
CAGATCTTCG (
9
)
7.4
0.0074
Adult retinal
CAACAAAACC (
8
)
5.6
0.0056
Adult retinal
CCACCTCTCA (
3
)
5.6
0.0056
Adult retinal
GGGAAGTCTG (
4
)
5.6
0.0056
Adult retinal
CCTGCAAGGA (
4
)
3.7
0.0037
Adult retinal
GGGGGGGGGG (
112
)
3.7
0.0037
Adult retinal
AAGATCTTTG (
7
)
1.9
0.0019
Adult retinal
CAGATTTTTC
(
3
)
1.9
0.0019
Adult retinal
CCAGCTCTAA (
4
)
1.9
0.0019
Adult retinal
GGCACAAGGT (
4
)
1.9
0.0019
Adult retinal
TGACCTCGGG
(
2
)
1.9
0.0019
ONL
CAGATCTTTG
(
6
)
19.2
0.0192
ONL
GAGGGCATCC (
4
)
5.7
0.0057
ONL
ACAAGAGATT (
3
)
3.8
0.0038
ONL
AAGATCTTTG (
7
)
1.9
0.0019
ONL
ACACCATAGA
(
2
)
1.9
0.0019
ONL
CAGATTTTTC
(
3
)
1.9
0.0019
ONL
CCACCTCTCA (
3
)
1.9
0.0019
ONL
GGCACAAGGT (
4
)
1.9
0.0019
ONL
GGGAAGTCTG (
4
)
1.9
0.0019
ONL
GGGGGGGGGG (
112
)
1.9
0.0019
