Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.335942	Set	SET translocation	2	2 B	56086
Gene Ontology	cell growth and/or maintenance | DNA binding | DNA replication | nucleosome assembly | nucleus | protein phosphatase inhibitor activity
Human Homolog	SET[SET translocation (myeloid leukemia-associated)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 169 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATCTGTCTA 48.9 0.0489 P8 Cb GC TTTAATTGTG 8.2 0.0082 P8 Cb GC ATGTTGAGAC (3) 4.9 0.0049 P8 Cb GC GATGATGAAG (5) 4.9 0.0049 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC GTGGTGTGGA (4) 3.3 0.0033 P8 Cb GC TCTTAACGTC 3.3 0.0033 P8 Cb GC TTGGTAAATG (3) 3.3 0.0033 P8 Cb GC TTGTCAGATG (2) 3.3 0.0033 P8 Cb GC CTCTGTGGGA (2) 1.6 0.0016 P8 Cb GC GTTCTCAATT 1.6 0.0016 P8 Cb GC TCGGGAACCA (2) 1.6 0.0016 Cb medulloblastoma TATCTGTCTA 6.9 0.0069 Cb medulloblastoma GTTTTCAATT (4) 4.6 0.0046 Cb medulloblastoma TCTGCGCCGA 2.3 0.0023 Cb medulloblastoma TTGGTAAATG (3) 2.3 0.0023 Cb medulloblastoma TTGTCAGATG (2) 2.3 0.0023 Cb medulloblastoma TTTAATTGTG 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture TATCTGTCTA 10.3 0.0103 P8 GC+1d culture GTTCTCAATT 9.1 0.0091 P8 GC+1d culture TCTTAACGTC 3.4 0.0034 P8 GC+1d culture TCGGGAACCA (2) 2.3 0.0023 P8 GC+1d culture ATGTTGAGAC (3) 1.1 0.0011 P8 GC+1d culture CTCTGTGGGA (2) 1.1 0.0011 P8 GC+1d culture TTGGTAAATG (3) 1.1 0.0011 P8 GC+1d culture TTTAATTGTG 1.1 0.0011 P8 GC+SHH+1d culture TATCTGTCTA 17.6 0.0176 P8 GC+SHH+1d culture TTTAATTGTG 10.5 0.0105 P8 GC+SHH+1d culture GTTCTCAATT 8.2 0.0082 P8 GC+SHH+1d culture TCTTAACGTC 8.2 0.0082 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture ATGTTGAGAC (3) 4.7 0.0047 P8 GC+SHH+1d culture GATGATGAAG (5) 3.5 0.0035 P8 GC+SHH+1d culture TCTGCGCCGA 2.3 0.0023 P8 GC+SHH+1d culture TTGTCAGATG (2) 2.3 0.0023 P8 GC+SHH+1d culture GTGGTGTGGA (4) 1.2 0.0012 P8 GC+SHH+1d culture TTGGTAAATG (3) 1.2 0.0012 3T3 fibroblasts TATCTGTCTA 3.5 0.0035 3T3 fibroblasts TTTAATTGTG 3.5 0.0035 E15 cortex TCTTAACGTC 14.8 0.0148 E15 cortex CTCTGTGGGA (2) 9.9 0.0099 E15 cortex GTTCTCAATT 4.9 0.0049 E15 cortex TCTGCGCCGA 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex TATCTGTCTA 13.6 0.0136 P1 cortex TTTAATTGTG 13.6 0.0136 P1 cortex ATGTTGAGAC (3) 9.1 0.0091 P1 cortex TCTTAACGTC 9.1 0.0091 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TATCTGTCTA 9.1 0.0091 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus ATGTTGAGAC (3) 5.4 0.0054 Hypothalamus GATGATGAAG (5) 5.4 0.0054 Hypothalamus TTGGTAAATG (3) 3.6 0.0036 Hypothalamus AAGATTTAAA 1.8 0.0018 Hypothalamus GTTCTCAATT 1.8 0.0018 Hypothalamus TCTTAACGTC 1.8 0.0018 Hypothalamus TTGTCAGATG (2) 1.8 0.0018 E12.5 retina TATCTGTCTA 62 0.062 E12.5 retina TTGGTAAATG (3) 16.9 0.0169 E12.5 retina ATGTTGAGAC (3) 11.3 0.0113 E12.5 retina GATGATGAAG (5) 11.3 0.0113 E12.5 retina TTTAATTGTG 7.5 0.0075 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina GTTCTCAATT 5.6 0.0056 E12.5 retina TTGTCAGATG (2) 5.6 0.0056 E12.5 retina GATGATGAAA (5) 3.8 0.0038 E12.5 retina GTGGTGTGGA (4) 1.9 0.0019 E12.5 retina TCTTAACGTC 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina TATCTGTCTA 18.2 0.0182 E14.5 retina ATGTTGAGAC (3) 12.8 0.0128 E14.5 retina CTCTGTGGGA (2) 7.3 0.0073 E14.5 retina GTGGTGTGGA (4) 5.5 0.0055 E14.5 retina TCTTAACGTC 5.5 0.0055 E14.5 retina TTGTCAGATG (2) 5.5 0.0055 E14.5 retina TTTAATTGTG 5.5 0.0055 E14.5 retina GTTCTCAATT 3.6 0.0036 E14.5 retina TCGGGAACCA (2) 3.6 0.0036 E14.5 retina TTGGTAAATG (3) 3.6 0.0036 E14.5 retina AAGATTTAAA 1.8 0.0018 E14.5 retina GATGATGAAG (5) 1.8 0.0018 E14.5 retina GCTTCTCCTT (8) 1.8 0.0018 E16.5 retina TATCTGTCTA 29 0.029 E16.5 retina ATGTTGAGAC (3) 14.5 0.0145 E16.5 retina GTTCTCAATT 7.2 0.0072 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina TTGTCAGATG (2) 3.6 0.0036 E16.5 retina GATGATGAAG (5) 1.8 0.0018 E16.5 retina GCTTCTCCTT (8) 1.8 0.0018 E16.5 retina GTGGTGTGGA (4) 1.8 0.0018 E16.5 retina TCGGGAACCA (2) 1.8 0.0018 E16.5 retina TCTTAACGTC 1.8 0.0018 E18.5 retina TATCTGTCTA 27.3 0.0273 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina ATGTTGAGAC (3) 9.1 0.0091 E18.5 retina GATGATGAAA (5) 7.3 0.0073 E18.5 retina GTTCTCAATT 5.5 0.0055 E18.5 retina CTCTGTGGGA (2) 3.6 0.0036 E18.5 retina TTGGTAAATG (3) 3.6 0.0036 E18.5 retina TTGTCAGATG (2) 3.6 0.0036 E18.5 retina TTTAATTGTG 3.6 0.0036 E18.5 retina AAGATTTAAA 1.8 0.0018 E18.5 retina GATGATGAAG (5) 1.8 0.0018 E18.5 retina TCTTAACGTC 1.8 0.0018 P0.5 retina ATGTTGAGAC (3) 9.8 0.0098 P0.5 retina TCTTAACGTC 9.8 0.0098 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina TATCTGTCTA 7.9 0.0079 P0.5 retina GATGATGAAG (5) 3.9 0.0039 P0.5 retina TTTAATTGTG 3.9 0.0039 P0.5 retina CTCTGTGGGA (2) 2 0.002 P0.5 retina GCTTCTCCTT (8) 2 0.002 P0.5 retina GTGGTGTGGA (4) 2 0.002 P0.5 retina TCGGGAACCA (2) 2 0.002 P0.5 retina TTGGTAAATG (3) 2 0.002 P2.5 retina TATCTGTCTA 21.1 0.0211 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina TTTAATTGTG 5.3 0.0053 P2.5 retina ATGTTGAGAC (3) 3.5 0.0035 P2.5 retina TTGTCAGATG (2) 3.5 0.0035 P2.5 retina CTCTGTGGGA (2) 1.8 0.0018 P2.5 retina TCTGCGCCGA 1.8 0.0018 P2.5 retina TCTTAACGTC 1.8 0.0018 P2.5 retina TTGGTAAATG (3) 1.8 0.0018 P4.5 retina TATCTGTCTA 21.8 0.0218 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina GTTCTCAATT 7.9 0.0079 P4.5 retina ATGTTGAGAC (3) 5.9 0.0059 P4.5 retina TTTAATTGTG 5.9 0.0059 P4.5 retina AAGATTTAAA 2 0.002 P4.5 retina GATGATGAAG (5) 2 0.002 P4.5 retina TCTGCGCCGA 2 0.002 P4.5 retina TCTTAACGTC 2 0.002 P4.5 retina TTGGTAAATG (3) 2 0.002 P6.5 retina TATCTGTCTA 10 0.01 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina ATGTTGAGAC (3) 6.7 0.0067 P6.5 retina GATGATGAAG (5) 1.7 0.0017 P6.5 retina TTGTCAGATG (2) 1.7 0.0017 P6.5 retina TTTAATTGTG 1.7 0.0017 P10.5 crx- retina TATCTGTCTA 9.3 0.0093 P10.5 crx- retina TCTTAACGTC 7.4 0.0074 P10.5 crx- retina ATGTTGAGAC (3) 5.6 0.0056 P10.5 crx- retina GTTCTCAATT 3.7 0.0037 P10.5 crx- retina AAGATTTAAA 1.9 0.0019 P10.5 crx- retina GATGATGAAG (5) 1.9 0.0019 P10.5 crx- retina TTGGTAAATG (3) 1.9 0.0019 P10.5 crx+ retina ATGTTGAGAC (3) 5.8 0.0058 P10.5 crx+ retina GTTCTCAATT 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina CTCTGTGGGA (2) 1.9 0.0019 P10.5 crx+ retina TATCTGTCTA 1.9 0.0019 P10.5 crx+ retina TTGTCAGATG (2) 1.9 0.0019 Adult retinal TATCTGTCTA 7.4 0.0074 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal ATGTTGAGAC (3) 3.7 0.0037 Adult retinal TCTTAACGTC 3.7 0.0037 Adult retinal AAGATTTAAA 1.9 0.0019 Adult retinal TTTAATTGTG 1.9 0.0019 ONL TATCTGTCTA 9.6 0.0096 ONL ATGTTGAGAC (3) 3.8 0.0038 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL AAGATTTAAA 1.9 0.0019 ONL GATGATGAAG (5) 1.9 0.0019 ONL GTTTTCAATT (4) 1.9 0.0019 ONL TTTAATTGTG 1.9 0.0019