Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.337558	Nap1l1	nucleosome assembly protein 1-like 1	10	10 60.0 cM	53605
Gene Ontology	DNA binding | nucleosome assembly | nucleus
Human Homolog	NAP1L1[nucleosome assembly protein 1-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 99 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGTTAGAGG (3) 8.2 0.0082 P8 Cb GC TGAAGACAGT (2) 6.5 0.0065 P8 Cb GC ACTATTCACA 4.9 0.0049 P8 Cb GC ATTTTTAAAA (13) 4.9 0.0049 P8 Cb GC ATAATCATCG (2) 1.6 0.0016 P8 Cb GC ATGAACCTAT (3) 1.6 0.0016 P8 Cb GC GGAAACTGTT (4) 1.6 0.0016 P8 Cb GC TCACTGAGCA (3) 1.6 0.0016 Cb medulloblastoma ATTTTTAAAA (13) 11.6 0.0116 P8 GC+1d culture ATTTTTAAAA (13) 14.8 0.0148 P8 GC+1d culture TTGTTAGAGG (3) 6.8 0.0068 P8 GC+1d culture ACTATTCACA 4.6 0.0046 P8 GC+1d culture ATGAACCTAT (3) 4.6 0.0046 P8 GC+1d culture TGAAGACAGT (2) 4.6 0.0046 P8 GC+SHH+1d culture ATGAACCTAT (3) 11.7 0.0117 P8 GC+SHH+1d culture TTGTTAGAGG (3) 10.5 0.0105 P8 GC+SHH+1d culture ATTTTTAAAA (13) 5.9 0.0059 P8 GC+SHH+1d culture TGAAGACAGT (2) 3.5 0.0035 P8 GC+SHH+1d culture ACTATTCACA 2.3 0.0023 P8 GC+SHH+1d culture GGAAACTGTT (4) 1.2 0.0012 3T3 fibroblasts ATCTCGAGAG (3) 31.5 0.0315 3T3 fibroblasts TTGTTAGAGG (3) 17.5 0.0175 3T3 fibroblasts TCACTGAGCA (3) 10.5 0.0105 3T3 fibroblasts TGAAGACAGT (2) 3.5 0.0035 E15 cortex ACTATTCACA 4.9 0.0049 E15 cortex ATCTCGAGAG (3) 4.9 0.0049 E15 cortex ATGAACCTAT (3) 4.9 0.0049 E15 cortex TGAAGACAGT (2) 4.9 0.0049 E15 cortex TTGTTAGAGG (3) 4.9 0.0049 P1 cortex ATGAACCTAT (3) 13.6 0.0136 P1 cortex ATTTTTAAAA (13) 13.6 0.0136 P1 cortex TTGTTAGAGG (3) 9.1 0.0091 Hypothalamus ATTTTTAAAA (13) 16.3 0.0163 Hypothalamus ACTATTCACA 1.8 0.0018 Hypothalamus ATAATCATCG (2) 1.8 0.0018 Hypothalamus TCACTGAGCA (3) 1.8 0.0018 Hypothalamus TTGTTAGAGG (3) 1.8 0.0018 E12.5 retina TTGTTAGAGG (3) 11.3 0.0113 E12.5 retina ACTATTCACA 9.4 0.0094 E12.5 retina ATTTTTAAAA (13) 7.5 0.0075 E12.5 retina TCACTGAGCA (3) 5.6 0.0056 E12.5 retina ATGAACCTAT (3) 3.8 0.0038 E12.5 retina ATCTCGAGAG (3) 1.9 0.0019 E12.5 retina TGAAGACAGT (2) 1.9 0.0019 E14.5 retina ACTATTCACA 3.6 0.0036 E14.5 retina ATTTTTAAAA (13) 1.8 0.0018 E14.5 retina TGAAGACAGT (2) 1.8 0.0018 E16.5 retina TTGTTAGAGG (3) 7.2 0.0072 E16.5 retina ATAATCATCG (2) 3.6 0.0036 E16.5 retina TGAAGACAGT (2) 3.6 0.0036 E16.5 retina ACTATTCACA 1.8 0.0018 E16.5 retina ATCTCGAGAG (3) 1.8 0.0018 E16.5 retina TCACTGAGCA (3) 1.8 0.0018 E16.5 retina TTCATTTATT (11) 1.8 0.0018 E18.5 retina ATTTTTAAAA (13) 7.3 0.0073 E18.5 retina TGAAGACAGT (2) 5.5 0.0055 E18.5 retina TTGTTAGAGG (3) 5.5 0.0055 E18.5 retina ACTATTCACA 3.6 0.0036 E18.5 retina ATGAACCTAT (3) 1.8 0.0018 E18.5 retina GGAAACTGTT (4) 1.8 0.0018 E18.5 retina TTCATTTATT (11) 1.8 0.0018 P0.5 retina TTGTTAGAGG (3) 15.7 0.0157 P0.5 retina ATGAACCTAT (3) 5.9 0.0059 P0.5 retina ATTTTTAAAA (13) 5.9 0.0059 P0.5 retina ACTATTCACA 2 0.002 P0.5 retina ATCTCGAGAG (3) 2 0.002 P2.5 retina ATTTTTAAAA (13) 3.5 0.0035 P2.5 retina TTGTTAGAGG (3) 3.5 0.0035 P2.5 retina ATGAACCTAT (3) 1.8 0.0018 P2.5 retina TCACTGAGCA (3) 1.8 0.0018 P2.5 retina TGAAGACAGT (2) 1.8 0.0018 P2.5 retina TTCATTTATT (11) 1.8 0.0018 P4.5 retina TTGTTAGAGG (3) 5.9 0.0059 P4.5 retina ACTATTCACA 2 0.002 P4.5 retina ATTTTTAAAA (13) 2 0.002 P4.5 retina TGAAGACAGT (2) 2 0.002 P4.5 retina TTCATTTATT (11) 2 0.002 P6.5 retina ATTTTTAAAA (13) 8.3 0.0083 P6.5 retina TTGTTAGAGG (3) 6.7 0.0067 P6.5 retina ATGAACCTAT (3) 5 0.005 P6.5 retina TGAAGACAGT (2) 5 0.005 P6.5 retina ATCTCGAGAG (3) 3.3 0.0033 P10.5 crx- retina ATTTTTAAAA (13) 5.6 0.0056 P10.5 crx- retina TTGTTAGAGG (3) 3.7 0.0037 P10.5 crx- retina ATAATCATCG (2) 1.9 0.0019 P10.5 crx+ retina TTGTTAGAGG (3) 5.8 0.0058 P10.5 crx+ retina ATTTTTAAAA (13) 3.8 0.0038 P10.5 crx+ retina ATCTCGAGAG (3) 1.9 0.0019 P10.5 crx+ retina ATGAACCTAT (3) 1.9 0.0019 P10.5 crx+ retina TCACTGAGCA (3) 1.9 0.0019 P10.5 crx+ retina TGAAGACAGT (2) 1.9 0.0019 Adult retinal ATTTTTAAAA (13) 9.3 0.0093 Adult retinal ATGAACCTAT (3) 1.9 0.0019 Adult retinal TCACTGAGCA (3) 1.9 0.0019 Adult retinal TGAAGACAGT (2) 1.9 0.0019 Adult retinal TTGTTAGAGG (3) 1.9 0.0019 ONL ATTTTTAAAA (13) 9.6 0.0096 ONL ATGAACCTAT (3) 5.7 0.0057 ONL TTCATTTATT (11) 1.9 0.0019