Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.33908	Sfrs12	splicing factor, arginine/serine-rich 12	13		218543
Gene Ontology	mRNA processing | nuclear mRNA splicing, via spliceosome | nucleic acid binding | nucleus | spliceosome complex
Human Homolog	SFRS12[splicing factor, arginine/serine-rich 12]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 106 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTTTTTCTT (2) 6.5 0.0065 P8 Cb GC AAGAGTTATG (4) 4.9 0.0049 P8 Cb GC GCCAAATTTG (6) 4.9 0.0049 P8 Cb GC GAGATTACAG (2) 3.3 0.0033 P8 Cb GC GCCAACCTTG (2) 1.6 0.0016 P8 Cb GC TAGCCTGGTC 1.6 0.0016 P8 Cb GC TGGTGGGTGC (2) 1.6 0.0016 P8 Cb GC TGTGGGTTGG (3) 1.6 0.0016 Cb medulloblastoma AGTTTTTCTT (2) 2.3 0.0023 Cb medulloblastoma TGGTGGGTGC (2) 2.3 0.0023 Cb medulloblastoma TTTTTTAAAA (15) 2.3 0.0023 P8 GC+1d culture GCCAAATTTG (6) 5.7 0.0057 P8 GC+1d culture AAGAGTTATG (4) 3.4 0.0034 P8 GC+1d culture GCCAACCTTG (2) 3.4 0.0034 P8 GC+1d culture AGTTTTTCTT (2) 2.3 0.0023 P8 GC+1d culture GAGATTACAG (2) 2.3 0.0023 P8 GC+SHH+1d culture GCCAAATTTG (6) 3.5 0.0035 P8 GC+SHH+1d culture TTTTTTAAAA (15) 3.5 0.0035 P8 GC+SHH+1d culture AAGAGTTATG (4) 2.3 0.0023 P8 GC+SHH+1d culture GCCAACCTTG (2) 2.3 0.0023 P8 GC+SHH+1d culture AGTTTTTCTT (2) 1.2 0.0012 P8 GC+SHH+1d culture GAGATTACAG (2) 1.2 0.0012 P8 GC+SHH+1d culture TAGCCTGGTC 1.2 0.0012 3T3 fibroblasts AGAAGGAGCG 7 0.007 3T3 fibroblasts TGGTGGGTGC (2) 7 0.007 3T3 fibroblasts GAGATTACAG (2) 3.5 0.0035 3T3 fibroblasts GCCAACCTTG (2) 3.5 0.0035 3T3 fibroblasts TGTGGGTTGG (3) 3.5 0.0035 E15 cortex AGTTTTTCTT (2) 9.9 0.0099 E15 cortex GCCAAATTTG (6) 9.9 0.0099 E15 cortex GCCAACCTTG (2) 9.9 0.0099 E15 cortex TGGGAGGGCC (3) 4.9 0.0049 P1 cortex TTGCTATGGT (2) 4.5 0.0045 Hypothalamus AAGAGTTATG (4) 7.2 0.0072 Hypothalamus GCCAAATTTG (6) 5.4 0.0054 Hypothalamus GAGATTACAG (2) 3.6 0.0036 Hypothalamus TGTGGGTTGG (3) 1.8 0.0018 E12.5 retina AAGAGTTATG (4) 5.6 0.0056 E12.5 retina GAGATTACAG (2) 5.6 0.0056 E12.5 retina TGTGGGTTGG (3) 5.6 0.0056 E12.5 retina GCCAAATTTG (6) 3.8 0.0038 E12.5 retina AGTTTTTCTT (2) 1.9 0.0019 E12.5 retina GCCAACCTTG (2) 1.9 0.0019 E14.5 retina GCCAAATTTG (6) 10.9 0.0109 E14.5 retina AGTTTTTCTT (2) 5.5 0.0055 E14.5 retina GAGATTACAG (2) 5.5 0.0055 E14.5 retina AAGAGTTATG (4) 3.6 0.0036 E14.5 retina AGAAGGAGCG 1.8 0.0018 E14.5 retina TGGGAGGGCC (3) 1.8 0.0018 E14.5 retina TGGTGGGTGC (2) 1.8 0.0018 E16.5 retina GCCAAATTTG (6) 3.6 0.0036 E16.5 retina TTGCTATGGT (2) 3.6 0.0036 E16.5 retina GCCAACCTTG (2) 1.8 0.0018 E16.5 retina TGGTGGGTGC (2) 1.8 0.0018 E18.5 retina GCCAAATTTG (6) 5.5 0.0055 E18.5 retina TTTTTTAAAA (15) 5.5 0.0055 E18.5 retina AAGAGTTATG (4) 3.6 0.0036 E18.5 retina AGTTTTTCTT (2) 1.8 0.0018 E18.5 retina GAGATTACAG (2) 1.8 0.0018 E18.5 retina TGTGGGTTGG (3) 1.8 0.0018 P0.5 retina AAGAGTTATG (4) 7.9 0.0079 P0.5 retina GCCAACCTTG (2) 7.9 0.0079 P0.5 retina GCCAAATTTG (6) 5.9 0.0059 P0.5 retina TGGTGGGTGC (2) 3.9 0.0039 P0.5 retina TGTGGGTTGG (3) 3.9 0.0039 P2.5 retina AAGAGTTATG (4) 12.3 0.0123 P2.5 retina GAGATTACAG (2) 7 0.007 P2.5 retina TGTGGGTTGG (3) 3.5 0.0035 P2.5 retina GCCAACCTTG (2) 1.8 0.0018 P2.5 retina TTGCTATGGT (2) 1.8 0.0018 P2.5 retina TTTTTTAAAA (15) 1.8 0.0018 P4.5 retina AAGAGTTATG (4) 13.9 0.0139 P4.5 retina GAGATTACAG (2) 7.9 0.0079 P4.5 retina GCCAAATTTG (6) 4 0.004 P4.5 retina TGTGGGTTGG (3) 4 0.004 P4.5 retina AGTTTTTCTT (2) 2 0.002 P6.5 retina AAGAGTTATG (4) 8.3 0.0083 P6.5 retina GAGATTACAG (2) 8.3 0.0083 P6.5 retina TGTGGGTTGG (3) 6.7 0.0067 P6.5 retina GCCAAATTTG (6) 5 0.005 P6.5 retina TTGCTATGGT (2) 3.3 0.0033 P6.5 retina AGTTTTTCTT (2) 1.7 0.0017 P6.5 retina TAGCCTGGTC 1.7 0.0017 P6.5 retina TGGGAGGGCC (3) 1.7 0.0017 P10.5 crx- retina AAGAGTTATG (4) 11.1 0.0111 P10.5 crx- retina GCCAAATTTG (6) 7.4 0.0074 P10.5 crx- retina GAGATTACAG (2) 5.6 0.0056 P10.5 crx- retina AGTTTTTCTT (2) 1.9 0.0019 P10.5 crx- retina TAGCCTGGTC 1.9 0.0019 P10.5 crx- retina TGGTGGGTGC (2) 1.9 0.0019 P10.5 crx+ retina GAGATTACAG (2) 9.6 0.0096 P10.5 crx+ retina AAGAGTTATG (4) 5.8 0.0058 P10.5 crx+ retina AGTTTTTCTT (2) 3.8 0.0038 P10.5 crx+ retina GCCAAATTTG (6) 3.8 0.0038 P10.5 crx+ retina TGTGGGTTGG (3) 3.8 0.0038 P10.5 crx+ retina AGAAGGAGCG 1.9 0.0019 P10.5 crx+ retina TGGTGGGTGC (2) 1.9 0.0019 Adult retinal AAGAGTTATG (4) 9.3 0.0093 Adult retinal GAGATTACAG (2) 5.6 0.0056 Adult retinal GCCAACCTTG (2) 3.7 0.0037 Adult retinal TGTGGGTTGG (3) 3.7 0.0037 Adult retinal GCCAAATTTG (6) 1.9 0.0019 Adult retinal TTGCTATGGT (2) 1.9 0.0019 ONL AAGAGTTATG (4) 3.8 0.0038 ONL GCCAAATTTG (6) 3.8 0.0038 ONL TGTGGGTTGG (3) 1.9 0.0019