Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.347120	A430106J12Rik	RIKEN cDNA A430106J12 gene	11		108686
Human Homolog	KIAA1212[KIAA1212]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 93 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC TAGGCAAAAC (14) 11.4 0.0114 P8 Cb GC CACGACAAGA 3.3 0.0033 P8 Cb GC ATTTTTTTTT (36) 1.6 0.0016 P8 Cb GC TCAGTAAAGC 1.6 0.0016 P8 Cb GC TTGAACAAAG (2) 1.6 0.0016 P8 Cb GC TTTGTATTAC 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma CACTTATAAA (4) 2.3 0.0023 Cb medulloblastoma TAGGCAAAAC (14) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TTTGTATTAC 2.3 0.0023 P8 GC+1d culture ATTTTTTTTT (36) 1.1 0.0011 P8 GC+1d culture CACGACAAGA 1.1 0.0011 P8 GC+1d culture TAGGCAAAAC (14) 1.1 0.0011 P8 GC+1d culture TTAAAAGCCT (4) 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture ATTTTTTTTT (36) 3.5 0.0035 P8 GC+SHH+1d culture CAATATACTT (2) 1.2 0.0012 P8 GC+SHH+1d culture CACTTATAAA (4) 1.2 0.0012 P8 GC+SHH+1d culture TCAGTAAAGC 1.2 0.0012 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts AGCTTGAGAA (3) 3.5 0.0035 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex AGCTTGAGAA (3) 4.9 0.0049 E15 cortex CACGACAAGA 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex ATTTTTTTTT (36) 4.5 0.0045 P1 cortex TTAAAAGCCT (4) 4.5 0.0045 P1 cortex TTGAACAAAG (2) 4.5 0.0045 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus CACGACAAGA 3.6 0.0036 Hypothalamus CACTTATAAA (4) 1.8 0.0018 Hypothalamus TAGGCAAAAC (14) 1.8 0.0018 Hypothalamus TTAAAAGCCT (4) 1.8 0.0018 Hypothalamus TTATCTTTCC (2) 1.8 0.0018 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TTATCTTTCC (2) 5.6 0.0056 E12.5 retina TAGGCAAAAC (14) 1.9 0.0019 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina TAGGCAAAAC (14) 5.5 0.0055 E14.5 retina ATTTTTTTTT (36) 1.8 0.0018 E14.5 retina CAATATACTT (2) 1.8 0.0018 E14.5 retina TGCACTCGTT (2) 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina GACTCCTGTG (5) 3.6 0.0036 E16.5 retina TTTGTATTAC 3.6 0.0036 E16.5 retina TAGGCAAAAC (14) 1.8 0.0018 E16.5 retina TTAAAAGCCT (4) 1.8 0.0018 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina TAGGCAAAAC (14) 7.3 0.0073 E18.5 retina TTATCTTTCC (2) 3.6 0.0036 E18.5 retina ATTTTTTTTT (36) 1.8 0.0018 E18.5 retina CAATATACTT (2) 1.8 0.0018 E18.5 retina CACGACAAGA 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina ATTTTTTTTT (36) 3.9 0.0039 P0.5 retina TAGGCAAAAC (14) 2 0.002 P0.5 retina TGCACTCGTT (2) 2 0.002 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina ATTTTTTTTT (36) 3.5 0.0035 P2.5 retina TAGGCAAAAC (14) 1.8 0.0018 P2.5 retina TGCACTCGTT (2) 1.8 0.0018 P2.5 retina TTATCTTTCC (2) 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina ATTTTTTTTT (36) 4 0.004 P4.5 retina AGCTTGAGAA (3) 2 0.002 P4.5 retina CACGACAAGA 2 0.002 P4.5 retina GACTCCTGTG (5) 2 0.002 P4.5 retina TAGGCAAAAC (14) 2 0.002 P4.5 retina TTAAAAGCCT (4) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina TAGGCAAAAC (14) 5 0.005 P6.5 retina CACTTATAAA (4) 3.3 0.0033 P6.5 retina TCAGTAAAGC 1.7 0.0017 P6.5 retina TTATCTTTCC (2) 1.7 0.0017 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina CACGACAAGA 3.7 0.0037 P10.5 crx- retina CACTTATAAA (4) 1.9 0.0019 P10.5 crx- retina TTATCTTTCC (2) 1.9 0.0019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TAGGCAAAAC (14) 3.8 0.0038 P10.5 crx+ retina TGCACTCGTT (2) 3.8 0.0038 P10.5 crx+ retina TTAAAAGCCT (4) 3.8 0.0038 P10.5 crx+ retina CAATATACTT (2) 1.9 0.0019 P10.5 crx+ retina CACTTATAAA (4) 1.9 0.0019 P10.5 crx+ retina TTTGTATTAC 1.9 0.0019 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal TAGGCAAAAC (14) 1.9 0.0019 Adult retinal TGCACTCGTT (2) 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL TAGGCAAAAC (14) 7.7 0.0077 ONL CACTTATAAA (4) 1.9 0.0019