Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.352859	Sf3b4	splicing factor 3b, subunit 4	15		107701
Gene Ontology	mRNA processing | nuclear mRNA splicing, via spliceosome | nucleic acid binding | nucleus | pre-mRNA splicing factor activity | RNA binding | spliceosome complex
Human Homolog	SF3B4[splicing factor 3b, subunit 4, 49kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTAAAAAAAA (80) 13.1 0.0131 P8 Cb GC TATAGAAAAA (6) 6.5 0.0065 P8 Cb GC GCCCCCCAGC (2) 3.3 0.0033 Cb medulloblastoma TTAAAAAAAA (80) 53.2 0.0532 Cb medulloblastoma TATAGAAAAA (6) 11.6 0.0116 P8 GC+1d culture TTAAAAAAAA (80) 28.5 0.0285 P8 GC+1d culture GCCCCCCAGC (2) 6.8 0.0068 P8 GC+1d culture TATAGAAAAA (6) 2.3 0.0023 P8 GC+SHH+1d culture TTAAAAAAAA (80) 34 0.034 P8 GC+SHH+1d culture TATAGAAAAA (6) 7 0.007 P8 GC+SHH+1d culture GCCCCCCAGC (2) 1.2 0.0012 3T3 fibroblasts GATACACGGG 3.5 0.0035 E15 cortex GCCCCCCAGC (2) 9.9 0.0099 E15 cortex TTAAAAAAAA (80) 4.9 0.0049 P1 cortex TTAAAAAAAA (80) 13.6 0.0136 P1 cortex TATAGAAAAA (6) 4.5 0.0045 Hypothalamus TTAAAAAAAA (80) 19.9 0.0199 E12.5 retina TATAGAAAAA (6) 22.5 0.0225 E12.5 retina TTAAAAAAAA (80) 11.3 0.0113 E14.5 retina TTAAAAAAAA (80) 16.4 0.0164 E14.5 retina TATAGAAAAA (6) 9.1 0.0091 E14.5 retina GCCCCCCAGC (2) 1.8 0.0018 E16.5 retina TTAAAAAAAA (80) 16.3 0.0163 E16.5 retina TATAGAAAAA (6) 7.2 0.0072 E16.5 retina GCCCCCCAGC (2) 3.6 0.0036 E18.5 retina TTAAAAAAAA (80) 50.9 0.0509 E18.5 retina TATAGAAAAA (6) 18.2 0.0182 P0.5 retina TTAAAAAAAA (80) 17.7 0.0177 P0.5 retina TATAGAAAAA (6) 7.9 0.0079 P0.5 retina GCCCCCCAGC (2) 2 0.002 P2.5 retina TTAAAAAAAA (80) 40.5 0.0405 P2.5 retina TATAGAAAAA (6) 7 0.007 P4.5 retina TTAAAAAAAA (80) 47.6 0.0476 P4.5 retina TATAGAAAAA (6) 15.9 0.0159 P4.5 retina GATACACGGG 2 0.002 P6.5 retina TTAAAAAAAA (80) 16.7 0.0167 P6.5 retina TATAGAAAAA (6) 6.7 0.0067 P10.5 crx- retina TTAAAAAAAA (80) 13 0.013 P10.5 crx- retina TATAGAAAAA (6) 1.9 0.0019 P10.5 crx+ retina TTAAAAAAAA (80) 5.8 0.0058 P10.5 crx+ retina TATAGAAAAA (6) 1.9 0.0019 Adult retinal TTAAAAAAAA (80) 7.4 0.0074 Adult retinal GATACACGGG 1.9 0.0019 ONL TATAGAAAAA (6) 9.6 0.0096 ONL TTAAAAAAAA (80) 7.7 0.0077