Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.38014
C030048B08Rik
RIKEN cDNA C030048B08 gene
5
269623
Human Homolog
DKFZP564O0523[hypothetical protein DKFZp564O0523]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 63 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAAAAAAAAA (
157
)
47.3
0.0473
P8 Cb GC
CTAAAAAAAA (
20
)
11.4
0.0114
P8 Cb GC
AAAATAAAAA (
28
)
6.5
0.0065
Cb medulloblastoma
CAAAAAAAAA (
157
)
92.5
0.0925
Cb medulloblastoma
CTAAAAAAAA (
20
)
39.3
0.0393
Cb medulloblastoma
AAAATAAAAA (
28
)
9.2
0.0092
Cb medulloblastoma
TGCCTTCTCA
2.3
0.0023
P8 GC+1d culture
CAAAAAAAAA (
157
)
37.7
0.0377
P8 GC+1d culture
CTAAAAAAAA (
20
)
19.4
0.0194
P8 GC+1d culture
AAAATAAAAA (
28
)
8
0.008
P8 GC+SHH+1d culture
CAAAAAAAAA (
157
)
58.5
0.0585
P8 GC+SHH+1d culture
CTAAAAAAAA (
20
)
41
0.041
P8 GC+SHH+1d culture
AAAATAAAAA (
28
)
5.9
0.0059
E15 cortex
CAAAAAAAAA (
157
)
34.6
0.0346
E15 cortex
CTAAAAAAAA (
20
)
14.8
0.0148
P1 cortex
CAAAAAAAAA (
157
)
22.7
0.0227
P1 cortex
AAAATAAAAA (
28
)
9.1
0.0091
P1 cortex
CTAAAAAAAA (
20
)
4.5
0.0045
Hypothalamus
CAAAAAAAAA (
157
)
39.8
0.0398
Hypothalamus
CTAAAAAAAA (
20
)
16.3
0.0163
Hypothalamus
AAAATAAAAA (
28
)
3.6
0.0036
Hypothalamus
TGCCTTCTCA
1.8
0.0018
E12.5 retina
CAAAAAAAAA (
157
)
22.5
0.0225
E12.5 retina
CTAAAAAAAA (
20
)
11.3
0.0113
E12.5 retina
AAAATAAAAA (
28
)
5.6
0.0056
E14.5 retina
AAAATAAAAA (
28
)
14.6
0.0146
E14.5 retina
CTAAAAAAAA (
20
)
12.8
0.0128
E14.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E16.5 retina
AAAATAAAAA (
28
)
10.9
0.0109
E16.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E16.5 retina
CTAAAAAAAA (
20
)
5.4
0.0054
E16.5 retina
TGCCTTCTCA
1.8
0.0018
E18.5 retina
CAAAAAAAAA (
157
)
41.8
0.0418
E18.5 retina
CTAAAAAAAA (
20
)
20
0.02
E18.5 retina
AAAATAAAAA (
28
)
16.4
0.0164
E18.5 retina
TGCCTTCTCA
3.6
0.0036
P0.5 retina
CAAAAAAAAA (
157
)
137.4
0.1374
P0.5 retina
AAAATAAAAA (
28
)
5.9
0.0059
P0.5 retina
CTAAAAAAAA (
20
)
5.9
0.0059
P0.5 retina
TGCCTTCTCA
2
0.002
P2.5 retina
CAAAAAAAAA (
157
)
52.8
0.0528
P2.5 retina
AAAATAAAAA (
28
)
19.4
0.0194
P2.5 retina
CTAAAAAAAA (
20
)
15.8
0.0158
P4.5 retina
CAAAAAAAAA (
157
)
41.6
0.0416
P4.5 retina
CTAAAAAAAA (
20
)
29.7
0.0297
P4.5 retina
AAAATAAAAA (
28
)
21.8
0.0218
P6.5 retina
CAAAAAAAAA (
157
)
31.7
0.0317
P6.5 retina
CTAAAAAAAA (
20
)
13.3
0.0133
P6.5 retina
AAAATAAAAA (
28
)
11.7
0.0117
P10.5 crx- retina
CAAAAAAAAA (
157
)
13
0.013
P10.5 crx- retina
CTAAAAAAAA (
20
)
5.6
0.0056
P10.5 crx- retina
AAAATAAAAA (
28
)
3.7
0.0037
P10.5 crx+ retina
CAAAAAAAAA (
157
)
32.7
0.0327
P10.5 crx+ retina
CTAAAAAAAA (
20
)
7.7
0.0077
P10.5 crx+ retina
AAAATAAAAA (
28
)
1.9
0.0019
P10.5 crx+ retina
TGCCTTCTCA
1.9
0.0019
Adult retinal
CAAAAAAAAA (
157
)
20.4
0.0204
Adult retinal
CTAAAAAAAA (
20
)
5.6
0.0056
Adult retinal
TGCCTTCTCA
5.6
0.0056
Adult retinal
AAAATAAAAA (
28
)
1.9
0.0019
ONL
CAAAAAAAAA (
157
)
17.2
0.0172
ONL
AAAATAAAAA (
28
)
11.5
0.0115
ONL
CTAAAAAAAA (
20
)
1.9
0.0019
