Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.40343
Stx1b2
syntaxin 1B2
7
56216
Mm.40343
Stx1b1
syntaxin 1B1
7
79361
No In Situ Hybridization images could be found.
SAGE Tags
Total 50 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TCCTGTCCCC (
3
)
8.2
0.0082
P8 Cb GC
AACCCCTGCC (
3
)
6.5
0.0065
Cb medulloblastoma
TCCTGTCCCC (
3
)
16.2
0.0162
Cb medulloblastoma
AACCCCTGCC (
3
)
2.3
0.0023
P8 GC+1d culture
AACCCCTGCC (
3
)
82.2
0.0822
P8 GC+1d culture
TCCTGTCCCC (
3
)
12.6
0.0126
P8 GC+1d culture
AGCCCCTGCC (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
AACCCCTGCC (
3
)
46.8
0.0468
P8 GC+SHH+1d culture
TCCTGTCCCC (
3
)
8.2
0.0082
3T3 fibroblasts
AACCCCTGCC (
3
)
77.1
0.0771
3T3 fibroblasts
TCCTGTCCCC (
3
)
3.5
0.0035
E15 cortex
AACCCCTGCC (
3
)
74.2
0.0742
E15 cortex
TCCTGTCCCC (
3
)
4.9
0.0049
P1 cortex
AACCCCTGCC (
3
)
54.5
0.0545
P1 cortex
TCCTGTCCCC (
3
)
4.5
0.0045
Hypothalamus
AACCCCTGCC (
3
)
10.9
0.0109
Hypothalamus
TCCTGTCCCC (
3
)
10.9
0.0109
Hypothalamus
AACACACACA (
24
)
5.4
0.0054
E12.5 retina
AACCCCTGCC (
3
)
9.4
0.0094
E14.5 retina
AACCCCTGCC (
3
)
12.8
0.0128
E14.5 retina
TCCTGTCCCC (
3
)
5.5
0.0055
E14.5 retina
AACACACACA (
24
)
1.8
0.0018
E16.5 retina
AACCCCTGCC (
3
)
9.1
0.0091
E16.5 retina
TCCTGTCCCC (
3
)
5.4
0.0054
E16.5 retina
AACACACACA (
24
)
1.8
0.0018
E18.5 retina
AACCCCTGCC (
3
)
12.7
0.0127
E18.5 retina
AGCCCCTGCC (
6
)
1.8
0.0018
E18.5 retina
TCCTGTCCCC (
3
)
1.8
0.0018
P0.5 retina
AACCCCTGCC (
3
)
64.8
0.0648
P0.5 retina
TCCTGTCCCC (
3
)
13.7
0.0137
P2.5 retina
AACCCCTGCC (
3
)
24.6
0.0246
P2.5 retina
TCCTGTCCCC (
3
)
10.6
0.0106
P4.5 retina
AACCCCTGCC (
3
)
21.8
0.0218
P4.5 retina
TCCTGTCCCC (
3
)
11.9
0.0119
P4.5 retina
AACACACACA (
24
)
2
0.002
P6.5 retina
AACCCCTGCC (
3
)
45
0.045
P6.5 retina
TCCTGTCCCC (
3
)
20
0.02
P6.5 retina
AACACACACA (
24
)
1.7
0.0017
P10.5 crx- retina
AACCCCTGCC (
3
)
42.7
0.0427
P10.5 crx- retina
TCCTGTCCCC (
3
)
13
0.013
P10.5 crx- retina
AGCCCCTGCC (
6
)
1.9
0.0019
P10.5 crx+ retina
TCCTGTCCCC (
3
)
30.8
0.0308
P10.5 crx+ retina
AACCCCTGCC (
3
)
21.1
0.0211
P10.5 crx+ retina
AACACACACA (
24
)
1.9
0.0019
Adult retinal
AACCCCTGCC (
3
)
29.6
0.0296
Adult retinal
TCCTGTCCCC (
3
)
20.4
0.0204
Adult retinal
AACACACACA (
24
)
3.7
0.0037
ONL
TCCTGTCCCC (
3
)
15.3
0.0153
ONL
AACCCCTGCC (
3
)
11.5
0.0115
ONL
AACACACACA (
24
)
3.8
0.0038
