Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41044	Slc4a4	solute carrier family 4 (anion exchanger), member 4	5		54403
Gene Ontology	anion transport | bicarbonate transport | inorganic anion exchanger activity | integral to membrane | integral to plasma membrane | membrane | regulation of pH | sodium ion transport | sodium:bicarbonate symporter activity
Human Homolog	SLC4A4[solute carrier family 4, sodium bicarbonate cotransporter, member 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCTCAGTT (3) 14.7 0.0147 P8 Cb GC AACTTGGCTG (3) 6.5 0.0065 P8 Cb GC CGTGCACGTG (2) 6.5 0.0065 P8 Cb GC GTGGAACAAA (2) 3.3 0.0033 P8 Cb GC TATGTGTGTG (19) 1.6 0.0016 P8 Cb GC TGTGTAAAAA (7) 1.6 0.0016 P8 Cb GC TTGATCTACT (3) 1.6 0.0016 P8 Cb GC TTTTTGTTTC (9) 1.6 0.0016 Cb medulloblastoma GTGGAACAAA (2) 20.8 0.0208 Cb medulloblastoma AAGCTCAGTT (3) 6.9 0.0069 Cb medulloblastoma TAACAACAAC (7) 4.6 0.0046 Cb medulloblastoma TGTGTAAAAA (7) 4.6 0.0046 Cb medulloblastoma AACTTGGCTG (3) 2.3 0.0023 Cb medulloblastoma CGTGCACGTG (2) 2.3 0.0023 Cb medulloblastoma TTGATCTACT (3) 2.3 0.0023 P8 GC+1d culture AAGCTCAGTT (3) 11.4 0.0114 P8 GC+1d culture CGTGCACGTG (2) 10.3 0.0103 P8 GC+1d culture AACTTGGCTG (3) 5.7 0.0057 P8 GC+1d culture TATGTGTGTG (19) 5.7 0.0057 P8 GC+1d culture GTGGAACAAA (2) 3.4 0.0034 P8 GC+1d culture TAACAACAAC (7) 2.3 0.0023 P8 GC+1d culture TTTTTGTTTC (9) 1.1 0.0011 P8 GC+SHH+1d culture TATGTGTGTG (19) 8.2 0.0082 P8 GC+SHH+1d culture AAGCTCAGTT (3) 7 0.007 P8 GC+SHH+1d culture AACTTGGCTG (3) 4.7 0.0047 P8 GC+SHH+1d culture TAACAACAAC (7) 2.3 0.0023 P8 GC+SHH+1d culture CGTGCACGTG (2) 1.2 0.0012 P8 GC+SHH+1d culture TGTGTAAAAA (7) 1.2 0.0012 3T3 fibroblasts CGTGCACGTG (2) 10.5 0.0105 3T3 fibroblasts AACTTGGCTG (3) 3.5 0.0035 3T3 fibroblasts AAGCTCAGTT (3) 3.5 0.0035 3T3 fibroblasts TATGTGTGTG (19) 3.5 0.0035 E15 cortex AAGCTCAGTT (3) 64.3 0.0643 E15 cortex CGTGCACGTG (2) 4.9 0.0049 P1 cortex AAGCTCAGTT (3) 13.6 0.0136 P1 cortex CGTGCACGTG (2) 9.1 0.0091 P1 cortex TATGTGTGTG (19) 9.1 0.0091 P1 cortex GTGACTGTGA (5) 4.5 0.0045 P1 cortex TTTTTGTTTC (9) 4.5 0.0045 Hypothalamus AAGCTCAGTT (3) 18.1 0.0181 Hypothalamus GTGGAACAAA (2) 3.6 0.0036 Hypothalamus TGTCTTGTCC (2) 3.6 0.0036 Hypothalamus AACTTGGCTG (3) 1.8 0.0018 Hypothalamus CGTGCACGTG (2) 1.8 0.0018 Hypothalamus TAACAACAAC (7) 1.8 0.0018 Hypothalamus TTTTTGTTTC (9) 1.8 0.0018 E12.5 retina CGTGCACGTG (2) 3.8 0.0038 E12.5 retina TATGTGTGTG (19) 1.9 0.0019 E14.5 retina AAGCTCAGTT (3) 16.4 0.0164 E14.5 retina AACTTGGCTG (3) 1.8 0.0018 E14.5 retina CGTGCACGTG (2) 1.8 0.0018 E16.5 retina AAGCTCAGTT (3) 16.3 0.0163 E16.5 retina AACTTGGCTG (3) 5.4 0.0054 E16.5 retina CGTGCACGTG (2) 5.4 0.0054 E16.5 retina GTGACTGTGA (5) 1.8 0.0018 E18.5 retina AAGCTCAGTT (3) 7.3 0.0073 E18.5 retina AACTTGGCTG (3) 1.8 0.0018 E18.5 retina CGTGCACGTG (2) 1.8 0.0018 P0.5 retina AAGCTCAGTT (3) 13.7 0.0137 P0.5 retina CGTGCACGTG (2) 5.9 0.0059 P0.5 retina AACTTGGCTG (3) 3.9 0.0039 P0.5 retina TATGTGTGTG (19) 3.9 0.0039 P0.5 retina TGTCTTGTCC (2) 2 0.002 P2.5 retina AAGCTCAGTT (3) 3.5 0.0035 P2.5 retina CGTGCACGTG (2) 1.8 0.0018 P2.5 retina GTGACTGTGA (5) 1.8 0.0018 P2.5 retina TATGTGTGTG (19) 1.8 0.0018 P2.5 retina TGTGTAAAAA (7) 1.8 0.0018 P4.5 retina AAGCTCAGTT (3) 7.9 0.0079 P4.5 retina CGTGCACGTG (2) 5.9 0.0059 P6.5 retina AACTTGGCTG (3) 8.3 0.0083 P6.5 retina CGTGCACGTG (2) 6.7 0.0067 P6.5 retina AAGCTCAGTT (3) 5 0.005 P10.5 crx- retina AAGCTCAGTT (3) 24.2 0.0242 P10.5 crx- retina CGTGCACGTG (2) 7.4 0.0074 P10.5 crx- retina AACTTGGCTG (3) 3.7 0.0037 P10.5 crx- retina TATGTGTGTG (19) 1.9 0.0019 P10.5 crx+ retina CGTGCACGTG (2) 5.8 0.0058 P10.5 crx+ retina AAGCTCAGTT (3) 3.8 0.0038 P10.5 crx+ retina TATGTGTGTG (19) 1.9 0.0019 P10.5 crx+ retina TGTCTTGTCC (2) 1.9 0.0019 Adult retinal AACTTGGCTG (3) 5.6 0.0056 Adult retinal CGTGCACGTG (2) 3.7 0.0037 Adult retinal AAGCTCAGTT (3) 1.9 0.0019 Adult retinal GTGGAACAAA (2) 1.9 0.0019 Adult retinal TATGTGTGTG (19) 1.9 0.0019 ONL AACTTGGCTG (3) 3.8 0.0038 ONL CGTGCACGTG (2) 1.9 0.0019