Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.41108
AF322649
cDNA sequence AF322649
7
210146
Human Homolog
LOC126298[similar to FKSG27]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 43 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGGAGCTGT
(
5
)
6.5
0.0065
P8 Cb GC
CCTGTAATCC (
34
)
6.5
0.0065
Cb medulloblastoma
CCTGTAATCC (
34
)
11.6
0.0116
Cb medulloblastoma
CCTGTATTCC (
4
)
2.3
0.0023
P8 GC+1d culture
AAGGAGCTGT
(
5
)
4.6
0.0046
P8 GC+1d culture
CCTGTAATCC (
34
)
1.1
0.0011
P8 GC+SHH+1d culture
AAGGAGCTGT
(
5
)
7
0.007
P8 GC+SHH+1d culture
CCTGTAATCC (
34
)
4.7
0.0047
3T3 fibroblasts
CCTGTAATCC (
34
)
10.5
0.0105
3T3 fibroblasts
TGCCAGTGAC (
3
)
3.5
0.0035
E15 cortex
CCTGTAATCC (
34
)
4.9
0.0049
E15 cortex
TGCCAGTGAC (
3
)
4.9
0.0049
P1 cortex
CCTGTAATCC (
34
)
13.6
0.0136
P1 cortex
TGCCAGTGAC (
3
)
13.6
0.0136
P1 cortex
CCTGTATTCC (
4
)
9.1
0.0091
Hypothalamus
CCTGTAATCC (
34
)
5.4
0.0054
Hypothalamus
AAGGAGCTGT
(
5
)
1.8
0.0018
Hypothalamus
CCTGTATTCC (
4
)
1.8
0.0018
E12.5 retina
CCTGTAATCC (
34
)
3.8
0.0038
E14.5 retina
CCTGTAATCC (
34
)
5.5
0.0055
E14.5 retina
CCTGTATTCC (
4
)
3.6
0.0036
E14.5 retina
AAGGAGCTGT
(
5
)
1.8
0.0018
E16.5 retina
CCTGTAATCC (
34
)
3.6
0.0036
E18.5 retina
AAGGAGCTGT
(
5
)
7.3
0.0073
E18.5 retina
CCTGTAATCC (
34
)
1.8
0.0018
P0.5 retina
CCTGTAATCC (
34
)
3.9
0.0039
P0.5 retina
AAGGAGCTGT
(
5
)
2
0.002
P2.5 retina
AAGGAGCTGT
(
5
)
5.3
0.0053
P2.5 retina
CCTGTAATCC (
34
)
3.5
0.0035
P4.5 retina
AAGGAGCTGT
(
5
)
5.9
0.0059
P4.5 retina
CCTGTAATCC (
34
)
5.9
0.0059
P6.5 retina
CCTGTAATCC (
34
)
1.7
0.0017
P6.5 retina
CCTGTATTCC (
4
)
1.7
0.0017
P10.5 crx- retina
CCTGTAATCC (
34
)
3.7
0.0037
P10.5 crx- retina
AAGGAGCTGT
(
5
)
1.9
0.0019
P10.5 crx- retina
CCTGTATTCC (
4
)
1.9
0.0019
P10.5 crx+ retina
CCTGTAATCC (
34
)
3.8
0.0038
P10.5 crx+ retina
AAGGAGCTGT
(
5
)
1.9
0.0019
Adult retinal
AAGACGGGTA
7.4
0.0074
Adult retinal
CCTGTAATCC (
34
)
3.7
0.0037
Adult retinal
AAGGAGCTGT
(
5
)
1.9
0.0019
ONL
AAGGAGCTGT
(
5
)
5.7
0.0057
ONL
CCTGTAATCC (
34
)
3.8
0.0038
