Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.41210
Sufu
suppressor of fused homolog (Drosophila)
19
19 47.0 cM
24069
Mm.41210
9430020M11Rik
RIKEN cDNA 9430020M11 gene
19
77251
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 74 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGATCTTTG (
6
)
34.3
0.0343
P8 Cb GC
ATCTTGGTGC
(
5
)
1.6
0.0016
P8 Cb GC
GAAGCCAGAG
(
4
)
1.6
0.0016
P8 Cb GC
TATGTTTAAG
(
2
)
1.6
0.0016
P8 Cb GC
TGATGGGTGC (
4
)
1.6
0.0016
Cb medulloblastoma
CAGATCTTTG (
6
)
9.2
0.0092
Cb medulloblastoma
TGATGGGTGC (
4
)
6.9
0.0069
Cb medulloblastoma
ATCTTGGTGC
(
5
)
4.6
0.0046
Cb medulloblastoma
TTCCTCCTTT
(
6
)
2.3
0.0023
P8 GC+1d culture
CAGATCTTTG (
6
)
41.1
0.0411
P8 GC+1d culture
TGATGGGTGC (
4
)
4.6
0.0046
P8 GC+1d culture
ATCTTGGTGC
(
5
)
2.3
0.0023
P8 GC+1d culture
GAAGCTAGAG (
3
)
1.1
0.0011
P8 GC+1d culture
TATGTTTAAG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
CAGATCTTTG (
6
)
42.2
0.0422
P8 GC+SHH+1d culture
ATCTTGGTGC
(
5
)
1.2
0.0012
P8 GC+SHH+1d culture
CCCTCTTCCT (
9
)
1.2
0.0012
P8 GC+SHH+1d culture
GAAGCTAGAG (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TGATGGGTGC (
4
)
1.2
0.0012
3T3 fibroblasts
CAGATCTTTG (
6
)
7
0.007
3T3 fibroblasts
TGATGGGTGC (
4
)
3.5
0.0035
E15 cortex
CAGATCTTTG (
6
)
24.7
0.0247
E15 cortex
CAGCCCTGGG (
12
)
4.9
0.0049
E15 cortex
TGATGGGTGC (
4
)
4.9
0.0049
P1 cortex
CAGATCTTTG (
6
)
40.9
0.0409
P1 cortex
GAAGCTAGAG (
3
)
4.5
0.0045
Hypothalamus
CAGATCTTTG (
6
)
14.5
0.0145
Hypothalamus
CCCTCTTCCT (
9
)
1.8
0.0018
Hypothalamus
GAAGCCAGAG
(
4
)
1.8
0.0018
E12.5 retina
CAGATCTTTG (
6
)
26.3
0.0263
E12.5 retina
AATAAAGGGC (
4
)
1.9
0.0019
E12.5 retina
CTTGCAGTTC (
3
)
1.9
0.0019
E12.5 retina
TGATGGGTGC (
4
)
1.9
0.0019
E14.5 retina
CAGATCTTTG (
6
)
10.9
0.0109
E14.5 retina
CCCTCTTCCT (
9
)
1.8
0.0018
E14.5 retina
CTGTGAACAG
(
2
)
1.8
0.0018
E14.5 retina
GAAGCTAGAG (
3
)
1.8
0.0018
E14.5 retina
TGATGGGTGC (
4
)
1.8
0.0018
E14.5 retina
TTCCTCCTTT
(
6
)
1.8
0.0018
E16.5 retina
CAGATCTTTG (
6
)
19.9
0.0199
E16.5 retina
AATAAAGGGC (
4
)
1.8
0.0018
E16.5 retina
TTCCTCCTTT
(
6
)
1.8
0.0018
E18.5 retina
CAGATCTTTG (
6
)
12.7
0.0127
E18.5 retina
TGATGGGTGC (
4
)
5.5
0.0055
E18.5 retina
GAAGCCAGAG
(
4
)
1.8
0.0018
E18.5 retina
GAAGCTAGAG (
3
)
1.8
0.0018
P0.5 retina
CAGATCTTTG (
6
)
35.3
0.0353
P0.5 retina
TGATGGGTGC (
4
)
3.9
0.0039
P0.5 retina
TTCCTCCTTT
(
6
)
3.9
0.0039
P0.5 retina
ATCTTGGTGC
(
5
)
2
0.002
P2.5 retina
CAGATCTTTG (
6
)
26.4
0.0264
P2.5 retina
TGATGGGTGC (
4
)
3.5
0.0035
P2.5 retina
CAGCCCTGGG (
12
)
1.8
0.0018
P2.5 retina
CTTGCAGTTC (
3
)
1.8
0.0018
P2.5 retina
GAAGCCAGAG
(
4
)
1.8
0.0018
P4.5 retina
TGATGGGTGC (
4
)
9.9
0.0099
P4.5 retina
CAGATCTTTG (
6
)
7.9
0.0079
P6.5 retina
CAGATCTTTG (
6
)
23.3
0.0233
P6.5 retina
TGATGGGTGC (
4
)
3.3
0.0033
P6.5 retina
CTTGCAGTTC (
3
)
1.7
0.0017
P6.5 retina
TATGTTTAAG
(
2
)
1.7
0.0017
P10.5 crx- retina
CAGATCTTTG (
6
)
3.7
0.0037
P10.5 crx- retina
CAGCCCTGGG (
12
)
1.9
0.0019
P10.5 crx- retina
TGATGGGTGC (
4
)
1.9
0.0019
P10.5 crx+ retina
CAGATCTTTG (
6
)
9.6
0.0096
P10.5 crx+ retina
TTCCTCCTTT
(
6
)
1.9
0.0019
Adult retinal
CAGATCTTTG (
6
)
25.9
0.0259
Adult retinal
TGATGGGTGC (
4
)
3.7
0.0037
Adult retinal
ATCTTGGTGC
(
5
)
1.9
0.0019
Adult retinal
CTTGCAGTTC (
3
)
1.9
0.0019
Adult retinal
TTCCTCCTTT
(
6
)
1.9
0.0019
ONL
CAGATCTTTG (
6
)
19.2
0.0192
ONL
CTGTGAACAG
(
2
)
3.8
0.0038
ONL
ATCTTGGTGC
(
5
)
1.9
0.0019
