Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41433	Dffa	DNA fragmentation factor, alpha subunit	4		13347
Gene Ontology	apoptosis | intracellular | protein binding
Human Homolog	DFFA[DNA fragmentation factor, 45kDa, alpha polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGGTGCTGG (64) 8.2 0.0082 P8 Cb GC ATTGACCTGC (2) 1.6 0.0016 P8 Cb GC GCTTTTATTT (3) 1.6 0.0016 P8 Cb GC GTTGATCATC 1.6 0.0016 P8 Cb GC TTGATTTGCT (2) 1.6 0.0016 Cb medulloblastoma TGGGTGCTGG (64) 9.2 0.0092 Cb medulloblastoma GTTGATCATC 4.6 0.0046 Cb medulloblastoma TACCATCAAG (3) 2.3 0.0023 P8 GC+1d culture TGGGTGCTGG (64) 5.7 0.0057 P8 GC+1d culture GTTGATCATC 3.4 0.0034 P8 GC+1d culture TCTTTAATCC (30) 2.3 0.0023 P8 GC+1d culture GCTTTTATTT (3) 1.1 0.0011 P8 GC+1d culture TACCATCAAG (3) 1.1 0.0011 P8 GC+1d culture TGACTTACAC (3) 1.1 0.0011 P8 GC+SHH+1d culture TCTTTAATCC (30) 4.7 0.0047 P8 GC+SHH+1d culture TGGGTGCTGG (64) 3.5 0.0035 P8 GC+SHH+1d culture GTTGATCATC 2.3 0.0023 P8 GC+SHH+1d culture GCTTTTATTT (3) 1.2 0.0012 P8 GC+SHH+1d culture TGCAACATCT (2) 1.2 0.0012 P8 GC+SHH+1d culture TTGATTTGCT (2) 1.2 0.0012 3T3 fibroblasts TGGGTGCTGG (64) 17.5 0.0175 3T3 fibroblasts TCTTTAATCC (30) 7 0.007 3T3 fibroblasts TACCATCAAG (3) 3.5 0.0035 E15 cortex TGGGTGCTGG (64) 14.8 0.0148 E15 cortex TCTTTAATCC (30) 4.9 0.0049 P1 cortex TGGGTGCTGG (64) 13.6 0.0136 P1 cortex GCTTTTATTT (3) 9.1 0.0091 P1 cortex TCTTTAATCC (30) 9.1 0.0091 Hypothalamus TGGGTGCTGG (64) 9.1 0.0091 Hypothalamus GTTGATCATC 3.6 0.0036 Hypothalamus TACCATCAAG (3) 1.8 0.0018 Hypothalamus TTGATTTGCT (2) 1.8 0.0018 E12.5 retina TGGGTGCTGG (64) 9.4 0.0094 E12.5 retina GTTGATCATC 3.8 0.0038 E12.5 retina GCTTTTATTT (3) 1.9 0.0019 E12.5 retina TACCATCAAG (3) 1.9 0.0019 E14.5 retina TGGGTGCTGG (64) 54.7 0.0547 E14.5 retina TCTTTAATCC (30) 21.9 0.0219 E14.5 retina GTTGATCATC 1.8 0.0018 E16.5 retina TGGGTGCTGG (64) 41.7 0.0417 E16.5 retina TCTTTAATCC (30) 9.1 0.0091 E16.5 retina ATTGACCTGC (2) 1.8 0.0018 E18.5 retina TGGGTGCTGG (64) 20 0.02 E18.5 retina GCTTTTATTT (3) 1.8 0.0018 E18.5 retina GTTGATCATC 1.8 0.0018 E18.5 retina TCTTTAATCC (30) 1.8 0.0018 E18.5 retina TTGATTTGCT (2) 1.8 0.0018 P0.5 retina TGGGTGCTGG (64) 11.8 0.0118 P0.5 retina GTTGATCAAA 3.9 0.0039 P0.5 retina TCTTTAATCC (30) 2 0.002 P0.5 retina TGACTTACAC (3) 2 0.002 P2.5 retina TGGGTGCTGG (64) 17.6 0.0176 P2.5 retina TCTTTAATCC (30) 1.8 0.0018 P4.5 retina TCTTTAATCC (30) 9.9 0.0099 P4.5 retina TGGGTGCTGG (64) 9.9 0.0099 P4.5 retina ATTGACCTGC (2) 2 0.002 P4.5 retina GTTGATCAAA 2 0.002 P4.5 retina TACCATCAAG (3) 2 0.002 P6.5 retina TGGGTGCTGG (64) 13.3 0.0133 P6.5 retina GCTTTTATTT (3) 1.7 0.0017 P6.5 retina GTTGATCATC 1.7 0.0017 P6.5 retina TGACTTACAC (3) 1.7 0.0017 P10.5 crx- retina TGGGTGCTGG (64) 20.4 0.0204 P10.5 crx- retina GCTTTTATTT (3) 3.7 0.0037 P10.5 crx- retina TGCAACATCT (2) 3.7 0.0037 P10.5 crx- retina TCTTTAATCC (30) 1.9 0.0019 P10.5 crx+ retina TGGGTGCTGG (64) 15.4 0.0154 P10.5 crx+ retina GCTTTTATTT (3) 1.9 0.0019 P10.5 crx+ retina TACCATCAAG (3) 1.9 0.0019 P10.5 crx+ retina TCTTTAATCC (30) 1.9 0.0019 Adult retinal TGGGTGCTGG (64) 13 0.013 Adult retinal TCTTTAATCC (30) 7.4 0.0074 Adult retinal TACCATCAAG (3) 1.9 0.0019 Adult retinal TGCAACATCT (2) 1.9 0.0019 ONL TGGGTGCTGG (64) 40.2 0.0402 ONL TCTTTAATCC (30) 13.4 0.0134 ONL GTTGATCAAA 3.8 0.0038