Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.44183
BC006909
cDNA sequence BC006909
7
233895
Human Homolog
MGC3121[hypothetical protein MGC3121]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGAAGGTTT
(
5
)
14.7
0.0147
P8 Cb GC
CACCACCACT (
20
)
1.6
0.0016
Cb medulloblastoma
GGGAAGGTTT
(
5
)
6.9
0.0069
P8 GC+1d culture
GGGAAGGTTT
(
5
)
6.8
0.0068
P8 GC+1d culture
CACCACCACT (
20
)
5.7
0.0057
P8 GC+1d culture
GGAAGCCAGG
(
4
)
1.1
0.0011
P8 GC+1d culture
TGGCCCTGGT (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
GGGAAGGTTT
(
5
)
10.5
0.0105
P8 GC+SHH+1d culture
CACCACCACT (
20
)
1.2
0.0012
3T3 fibroblasts
GGGAAGGTTT
(
5
)
3.5
0.0035
P1 cortex
CACCACCACT (
20
)
4.5
0.0045
P1 cortex
GGGAAGGTTT
(
5
)
4.5
0.0045
P1 cortex
TGGCCCTGGT (
5
)
4.5
0.0045
Hypothalamus
CACCACCACT (
20
)
5.4
0.0054
Hypothalamus
GGGAAGGTTT
(
5
)
1.8
0.0018
Hypothalamus
TGGCCCTGGT (
5
)
1.8
0.0018
E12.5 retina
CACCACCACT (
20
)
5.6
0.0056
E12.5 retina
TGGCCCTGGT (
5
)
1.9
0.0019
E14.5 retina
CACCACCACT (
20
)
3.6
0.0036
E14.5 retina
GGGAAGGTTT
(
5
)
3.6
0.0036
E16.5 retina
CACCACCACT (
20
)
1.8
0.0018
E16.5 retina
GGGAAGGTTT
(
5
)
1.8
0.0018
E18.5 retina
GGGAAGGTTT
(
5
)
7.3
0.0073
E18.5 retina
CACCACCACT (
20
)
5.5
0.0055
P0.5 retina
CACCACCACT (
20
)
3.9
0.0039
P0.5 retina
GGGAAGGTTT
(
5
)
3.9
0.0039
P2.5 retina
CACCACCACT (
20
)
5.3
0.0053
P2.5 retina
GGGAAGGTTT
(
5
)
3.5
0.0035
P2.5 retina
GGAAGCCAGG
(
4
)
1.8
0.0018
P4.5 retina
GGGAAGGTTT
(
5
)
15.9
0.0159
P4.5 retina
CACCACCACT (
20
)
4
0.004
P6.5 retina
GGGAAGGTTT
(
5
)
10
0.01
P6.5 retina
CACCACCACT (
20
)
5
0.005
P6.5 retina
GGAAGCCAGG
(
4
)
1.7
0.0017
P10.5 crx- retina
GGGAAGGTTT
(
5
)
9.3
0.0093
P10.5 crx- retina
CACCACCACT (
20
)
1.9
0.0019
P10.5 crx+ retina
CACCACCACT (
20
)
3.8
0.0038
P10.5 crx+ retina
GGGAAGGTTT
(
5
)
1.9
0.0019
Adult retinal
CACCACCACT (
20
)
9.3
0.0093
Adult retinal
GGGAAGGTTT
(
5
)
9.3
0.0093
ONL
GGGAAGGTTT
(
5
)
5.7
0.0057
ONL
CACCACCACT (
20
)
3.8
0.0038
