Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.46044	Akap9	A kinase (PRKA) anchor protein (yotiao) 9	5		100986
Gene Ontology	cytoplasm | kinase activity | pericentriolar material | protein binding
Human Homolog	AKAP9[A kinase (PRKA) anchor protein (yotiao) 9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATATTGAAGA (2) 11.4 0.0114 P8 Cb GC AAGAGAAAAC (5) 3.3 0.0033 P8 Cb GC TTTCTGCTTA (2) 3.3 0.0033 P8 Cb GC AGGAGATAAT 1.6 0.0016 P8 Cb GC ATGCCCAGTT 1.6 0.0016 P8 Cb GC GAGATAAATG 1.6 0.0016 Cb medulloblastoma TTTCTGCTTA (2) 4.6 0.0046 Cb medulloblastoma AAGCCGAGAT 2.3 0.0023 Cb medulloblastoma GTGTTTCCTT (6) 2.3 0.0023 P8 GC+1d culture ATATTGAAGA (2) 11.4 0.0114 P8 GC+1d culture TTTCTGCTTA (2) 10.3 0.0103 P8 GC+1d culture AGGAGATAAT 2.3 0.0023 P8 GC+1d culture ATTTCTATGT 1.1 0.0011 P8 GC+1d culture GTGTTTCCTT (6) 1.1 0.0011 P8 GC+1d culture TCACAGAGTT (3) 1.1 0.0011 P8 GC+SHH+1d culture ATATTGAAGA (2) 8.2 0.0082 P8 GC+SHH+1d culture GAAAAGTTGC (3) 3.5 0.0035 P8 GC+SHH+1d culture AGAAATCAGG (3) 2.3 0.0023 P8 GC+SHH+1d culture AGGAGATAAT 2.3 0.0023 P8 GC+SHH+1d culture TTTCTGCTTA (2) 2.3 0.0023 P8 GC+SHH+1d culture ATTTCTATGT 1.2 0.0012 P8 GC+SHH+1d culture TATATTTGTG (2) 1.2 0.0012 3T3 fibroblasts GTGTTTCCTT (6) 3.5 0.0035 3T3 fibroblasts TTTCTGCTTA (2) 3.5 0.0035 E15 cortex AAGCCGAGAT 9.9 0.0099 P1 cortex AAGCCGAGAT 9.1 0.0091 P1 cortex TTTCTGCTTA (2) 9.1 0.0091 P1 cortex AGGAGATAAT 4.5 0.0045 P1 cortex ATATTGAAGA (2) 4.5 0.0045 Hypothalamus ATATTGAAGA (2) 16.3 0.0163 Hypothalamus GAAAAGTTGC (3) 7.2 0.0072 Hypothalamus AGAAATCAGG (3) 1.8 0.0018 E12.5 retina ATATTGAAGA (2) 18.8 0.0188 E12.5 retina TTTCTGCTTA (2) 3.8 0.0038 E12.5 retina AAGCCGAGAT 1.9 0.0019 E12.5 retina ATTTCTATGT 1.9 0.0019 E12.5 retina TATATTTGTG (2) 1.9 0.0019 E12.5 retina TCACAGAGTT (3) 1.9 0.0019 E14.5 retina ATATTGAAGA (2) 5.5 0.0055 E14.5 retina AGAAATCAGG (3) 1.8 0.0018 E14.5 retina GAAAAGGAGA (7) 1.8 0.0018 E14.5 retina GAAAAGTTGC (3) 1.8 0.0018 E14.5 retina GTGTTTCCTT (6) 1.8 0.0018 E14.5 retina TTTCTGCTTA (2) 1.8 0.0018 E14.5 retina TTTTTGCTTA (2) 1.8 0.0018 E16.5 retina ATATTGAAGA (2) 10.9 0.0109 E16.5 retina GAAAAGTTGC (3) 3.6 0.0036 E16.5 retina TTTCTGCTTA (2) 3.6 0.0036 E16.5 retina TATATTTGTG (2) 1.8 0.0018 E16.5 retina TCACAGAGTT (3) 1.8 0.0018 E18.5 retina ATATTGAAGA (2) 5.5 0.0055 E18.5 retina AGGAGATAAT 1.8 0.0018 E18.5 retina GTGTTTCCTT (6) 1.8 0.0018 E18.5 retina TTTCTGCTTA (2) 1.8 0.0018 E18.5 retina TTTTTGCTTA (2) 1.8 0.0018 P0.5 retina ATGCCCAGTT 2 0.002 P0.5 retina GAGATAAATG 2 0.002 P0.5 retina TCACAGAGTT (3) 2 0.002 P2.5 retina ATATTGAAGA (2) 7 0.007 P2.5 retina TTTCTGCTTA (2) 3.5 0.0035 P2.5 retina AGAAATCAGG (3) 1.8 0.0018 P2.5 retina GAAAAGTTGC (3) 1.8 0.0018 P4.5 retina ATATTGAAGA (2) 13.9 0.0139 P4.5 retina TTTCTGCTTA (2) 5.9 0.0059 P4.5 retina GAGATAAATG 2 0.002 P6.5 retina ATATTGAAGA (2) 11.7 0.0117 P6.5 retina CTGCCCTGCA (3) 3.3 0.0033 P6.5 retina GAAAAGTTGC (3) 1.7 0.0017 P6.5 retina TATATTTGTG (2) 1.7 0.0017 P6.5 retina TTTCTGCTTA (2) 1.7 0.0017 P6.5 retina TTTTTGCTTA (2) 1.7 0.0017 P10.5 crx- retina ATATTGAAGA (2) 9.3 0.0093 P10.5 crx- retina GAAAAGTTGC (3) 1.9 0.0019 P10.5 crx- retina TTTCTGCTTA (2) 1.9 0.0019 P10.5 crx+ retina ATATTGAAGA (2) 13.5 0.0135 P10.5 crx+ retina TTTTTGCTTA (2) 1.9 0.0019 Adult retinal ATATTGAAGA (2) 9.3 0.0093 Adult retinal AAGAGAAAAC (5) 3.7 0.0037 Adult retinal CTGCCCTGCA (3) 1.9 0.0019 ONL ATATTGAAGA (2) 13.4 0.0134 ONL AAGAGAAAAC (5) 1.9 0.0019 ONL AGAAATCAGG (3) 1.9 0.0019 ONL ATGCCCAGTT 1.9 0.0019 ONL GAAAAGTTGC (3) 1.9 0.0019 ONL GTGTTTCCTT (6) 1.9 0.0019